KEGG   Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_019198
Entry
Pst134EA_019198   CDS       T09520                                 
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
pstr  Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03013  Nucleocytoplasmic transport
pstr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pstr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Pst134EA_019198
  09122 Translation
   03013 Nucleocytoplasmic transport
    Pst134EA_019198
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pstr03019]
    Pst134EA_019198
   03041 Spliceosome [BR:pstr03041]
    Pst134EA_019198
Messenger RNA biogenesis [BR:pstr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     Pst134EA_019198
Spliceosome [BR:pstr03041]
 Complex C
  Other components
   EJC/TREX
    Pst134EA_019198
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    Pst134EA_019198
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz WD40 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR5 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_1st ANAPC4_WD40 EIF3I WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Tricorn_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N RMC1_N Beta-prop_Aladin DSE1_N Beta-prop_NOL10_N Beta-prop_EIPR1 eIF2A CFAP251_N WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_RSE1_2nd Beta-prop_SPT8 PEP5_VPS11_N Beta-prop_DCAF12 ASA1 Beta-prop_NUP159_NUP214 Beta-prop_TEP1_C Nucleoporin_N Beta-prop_WDR11_1st Beta-prop_RSE1_1st Lactonase Cytochrom_D1 MIOS_WD40 TRM82_WD
Other DBs
NCBI-GeneID: 72030484
NCBI-ProteinID: XP_047803120
LinkDB
Position
10:1249643..1251709
AA seq 324 aa
MTTKPPTTRLLTGHTGPVFTLGWSVDGRKLASGSKDEGIRIWNPDRADYGKASAELKGHS
SRINQLRWDPTHPERLASAGEDGTLRFWDIRQGSKPIKTVENESKLSFLNLCWSPDATVI
AIGDSKDRLQFYDTSTGKKLTEHVEYSTSPTASEGQKDQINEVAFSHSGDYLFVPTGAGS
VVTYKFERDGNNESAKLTQFHRYDAHACVINCIDIDPRGRYIAVGGADSIVSLIDLEDFY
CVNTFAHLESDVRTISFSYDGDFIAVAGKDFFIDVSTVSTGQQVRKIDNLTYPVNSIAWH
PSKYVLAYAGDEKAGNVRVVNLAS
NT seq 975 nt   +upstreamnt  +downstreamnt
atgaccaccaagccacccaccacaagactactcaccggccacacaggacctgttttcacg
ctgggttggtcagtcgatggaaggaaactagccagtggttcgaaagacgaaggaatcagg
atatggaatccagatcgagctgattatgggaaggcttccgctgaattgaaaggtcattct
agtaggatcaatcagttacgatgggatccgactcatcctgaacgattagcaagtgcaggc
gaagatggaaccttacgattctgggacatccgacagggatcaaagccgatcaaaactgta
gaaaacgaatccaaactctcgttcctcaatctttgttggtcaccagatgcaacggtcatc
gcgattggagactcgaaagatagactacaattctatgacacatcaactggaaaaaaattg
actgaacatgttgaatattctacgagtcccacagctagtgaaggacaaaaagatcaaatc
aatgaagtcgcattctcacattctggtgattatttattcgtgcctactggcgctggatca
gtggtgacatacaaattcgaaagagatgggaataatgagtctgctaaattaacccaattt
catcgttacgatgctcatgcttgtgtcatcaattgtattgatatcgatcctagaggtcga
tatattgctgtaggaggggcagattcgatcgtcagtttaatagatctagaagacttttat
tgtgttaatacttttgctcatctcgaatcggatgtccggaccataagtttctcttacgat
ggagattttatagcagttgcaggaaaagatttctttattgatgtatcgacagtatcaaca
ggacaacaagtacgaaaaatcgataatctaacttatcctgttaatagcattgcttggcat
ccttctaaatacgtacttgcttatgctggtgatgagaaagctggtaacgttagagtcgtt
aatttggcctcctga

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