Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_019338
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Entry
Pst134EA_019338 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03440
Homologous recombination
pstr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pst134EA_019338
03460 Fanconi anemia pathway
Pst134EA_019338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pstr03032
]
Pst134EA_019338
03400 DNA repair and recombination proteins [BR:
pstr03400
]
Pst134EA_019338
Enzymes [BR:
pstr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Pst134EA_019338
DNA replication proteins [BR:
pstr03032
]
Eukaryotic type
DNA Topoisomerases
Pst134EA_019338
DNA repair and recombination proteins [BR:
pstr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
Pst134EA_019338
FA (Fanconi anemia) pathway
Pst134EA_019338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
zf-CCHC
Toprim
zf-CCHC_2
zf-CCHC_3
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
72030624
NCBI-ProteinID:
XP_047803259
LinkDB
All DBs
Position
10:complement(1942001..1946592)
Genome browser
AA seq
1042 aa
AA seq
DB search
MRVLCVAEKPSIARAITEILSGNQFTTRQSPNRYTKNFDFHYRLPPAPQHVNFTVTSVLG
HLTSTDFDDHYKGWKNCDPFSLFDAPINRFVNPDHKGIERNLKAESRSADKLMIWTDCDR
EGEHIGSEIVSVCRAAKPNIIVLRARFSAIIPAQIHNACQNAGQLDMNQVYAVQVRMELD
LRIGAALTRCQTMGLQTRFDQLADSLISYGPCQFPTLGFVVDQYDKVKAFVPETFWYIQA
VLERDESTVQFSWKRHRLFDYPAAFVLHEMCTDDPEATVTDVNVKPAVKWKPLPLTTVEL
QKSGSRLLHLTPKTVLDIAEKLYQKGLVSYPRTETDQFDRDFDLMGLIEKQMNDNQWGDF
ATRLKDGDGFQTPRNGRKNDKAHPPIHPTAHANNLTGDEKRVYEFITRRYLACCSKNATG
KTTTVVIDIAGEVFTATGLVIIERNYLEVYVYDKWNGTLLPDFQIGEKFMPTSCDLKEGT
TTRPNLLTEADLVGLMDRNGIGTDATIAEHIAKIIDRNYVFKIREGATQYLVPSTLGIGL
VEGYNAIGLDKSLSKPQLRRETENRMTLICEGARTKADVLTQTIDEYREVFIRTRRAFGT
IVEQVARYLNAAAGQDANDSEDDVGGPGRGGGGGGGGGGDGGGNGGGRGGQGPGARGSRR
GRGTRQNNPGPGPSRGNGRPPSSDDDSDHGGGPSGGTTRGARGSSRASRATTGTRGTKST
SAAASSRTAATSTSAFKTTGRSDDIAPLCKCGSQTVERPVVKDGPNKGRMFYACPKPQSE
GSCGFQGWADDPGGGTNGNTSRTNAQKRPAGEASLGLPSSRRPKTKESQDPLRCSCDLEA
VCRVAGKDGPNKGRAFWVCSKVSKVAQCKFFKWDDEAEGGGPTAGPSTTNNSTTNTTDKN
SCFKCGQQGHWSNQCPNQSQGNNNNNNTAQGSSNYTCFSCNEQGHLSTNCPNKDGTAGGN
AGPSSAGQKCFHCDQAGHWANACPSRNQGTSGPSRTGSSSRGRGGAGRGTTRKPRKRGAS
TAGRGGTGRRKKNADVDSGNDY
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttctatgtgttgccgaaaagccatctatagcgcgtgcaattacggagattctc
tcaggaaatcaatttacgacacgtcaatcgccaaaccgatacacaaagaactttgatttc
cactatcgattaccacctgcacctcaacatgtcaatttcactgtgacttcagtattggga
catttgacatccaccgacttcgatgaccactataagggatggaagaattgtgacccattc
tcgttgttcgatgctccaatcaatcggttcgtcaatccagatcataaagggatcgaacgt
aatctcaaggctgaatctcgtagcgccgataagttgatgatctggaccgattgcgataga
gagggggagcatatcgggtcggaaatcgtgtcggtttgtcgtgccgccaaaccaaatatt
atagtgcttcgagctagatttagtgcaattatccccgctcaaatacataacgcttgtcaa
aacgctggccaattggatatgaatcaagtctatgcggttcaagtaaggatggagctcgac
cttcgtatcggtgcggctcttacgagatgtcaaaccatggggctacagacccgattcgat
caactagctgacagcctgatcagttacgggccttgtcaatttccaacactaggattcgtc
gttgaccagtatgataaagtcaaagcatttgtccctgagactttttggtatatccaagca
gtcttggaaagagatgagtccacagtccaattcagctggaagcgacatcgtttattcgat
tatcctgctgctttcgtgttacacgagatgtgtaccgatgatcctgaggcgacagtaacg
gatgtgaatgtcaagccggctgtgaaatggaagcctttgccactcaccacagtcgaactt
cagaaatcaggttctagattacttcatctgaccccgaagacagttttagacatcgcggag
aaactttatcagaaaggtttggtcagctacccacgaactgaaactgaccaattcgatcgt
gactttgatttgatgggattgatcgaaaagcaaatgaatgacaatcaatggggcgatttt
gcaacaagacttaaggatggtgatggcttccaaacaccgcggaatggaaggaagaatgat
aaagcacatcccccgatccacccaaccgctcatgcaaacaacttgactggggatgagaag
cgggtctatgagtttatcacccgacgctacctggcctgctgttcgaagaatgcaactggt
aagaccactaccgtcgtcatcgacattgccggtgaagtcttcacggccacaggtctggtg
atcatcgagaggaactatctcgaggtttacgtctacgataaatggaatggaacgctcctt
cccgatttccaaattggcgagaaattcatgccgacttcttgcgacttgaaagagggcacg
acgacccgtccgaatctgttgactgaagccgatttggtcggactcatggatcgaaacgga
atagggaccgacgcaactattgccgaacatatcgcgaaaattattgacaggaactatgtc
ttcaagattcgtgaaggtgcaactcaatacctcgtaccatccacactgggtatcggattg
gtcgaaggatacaatgcgattggactggacaaatctctgagcaaaccacagcttagaaga
gagactgaaaatcgaatgacattaatatgcgagggggcaaggaccaaggccgatgtgcta
acccaaacaatcgacgagtaccgcgaagtgttcatacgaaccaggcgagcttttggtacg
attgtggagcaggttgcgcgctacctcaacgcagctgcaggccaagacgccaacgactca
gaagatgatgtcggaggtcctggacgaggaggaggtggtggtggtggaggtggaggtgat
ggaggtggcaatggcggtggcagaggcggacagggtcctggtgctcgtggctctagacgc
ggtcggggaacgcggcaaaacaaccctggaccgggcccatcgagaggcaacggtcgacca
ccctcgagtgacgatgatagcgatcatggtggtggtcctagtggaggaacaactcgaggc
gcgcgtggatcttcaagagccagtcgtgctacaacaggtacccgtggaactaaatctacc
tccgcagcggcttcatcccgaactgccgctacttctacctccgccttcaaaacgactggt
cgcagtgatgatattgctcctctttgtaagtgcggctctcagacagtcgagcggccggtt
gtaaaagatggcccgaacaaaggtcgaatgttctatgcatgtccgaagccacaaagcgaa
gggagttgtgggttccagggatgggcggatgatcctggtggtggaacaaacggaaacaca
tcccgcacaaacgctcaaaaacgcccagccggtgaggcttcactaggactaccgtcttca
cgtcgtccaaagaccaaggagtctcaggatccccttcggtgtagttgcgaccttgaagct
gtctgtagagtggcaggaaaggacgggcctaacaaaggtcgcgcattctgggtctgtagc
aaggtctccaaagtggcccaatgtaaatttttcaagtgggatgacgaggctgaggggggc
ggaccaactgccggaccatcgaccactaataattcaacgacaaacacaactgacaagaat
agttgttttaaatgtggacaacagggacattggagtaaccagtgtcccaatcaatcgcaa
gggaataataataataataatactgcacaaggctcttccaattacacttgcttctcatgt
aatgaacagggacatctttcgaccaactgccccaataaagatggcactgctgggggcaac
gctggcccgagctcggcgggccagaagtgctttcattgtgaccaagctggtcattgggca
aatgcatgtccctcaaggaaccagggcaccagtggcccctctcggacgggctcctcatca
aggggaagaggaggggccggtcgaggaacaaccaggaaaccgaggaaaaggggtgcaagt
acggctggtcgtgggggtaccgggagacgcaaaaagaatgccgacgtggactctggcaat
gactattga
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