Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_020858
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Entry
Pst134EA_020858 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03440
Homologous recombination
pstr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pst134EA_020858
03450 Non-homologous end-joining
Pst134EA_020858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pstr03032
]
Pst134EA_020858
03400 DNA repair and recombination proteins [BR:
pstr03400
]
Pst134EA_020858
DNA replication proteins [BR:
pstr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
Pst134EA_020858
DNA repair and recombination proteins [BR:
pstr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
Pst134EA_020858
BRCA1-C complex
Pst134EA_020858
NHEJ (non-homologous end-joining)
MRX complex
Pst134EA_020858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_21
CENP-F_leu_zip
DUF1664
Sbi-IV
Motif
Other DBs
NCBI-GeneID:
72031250
NCBI-ProteinID:
XP_047802158
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All DBs
Position
11:849393..853493
Genome browser
AA seq
759 aa
AA seq
DB search
MYDSQLSNAFCRVQSHGTKFREAVGMDLKPETAEKDINGVIRLAEKSLSDATQRCAEVTK
EMQTSHTKLQMSKSKLASTKAELESLDRKVKRATEGGKVSTLIVDTEDSLQEAQRDLDGM
GFVVAFHEGLLKKAKDTNKCGGCQRPFHSNNEMSAFEAYCQTTIERLPAKKRKGEEELKE
WHEQLERLKKVLPLEISATKLRDVDIPHLQKDINELESKFDASNRKAEEAQAEVEKSKDQ
IGELELCKRFAVDMSRMFGEIAELKSEIKNLERDLESSGTTRTADQVQEQLDDLQLNLGE
SKRELESLIGDRDRRRTTIHNLETEIHQLEISLNSKRQQKKEKEAFEVQKEGLKKEIVEL
EEKVKTTEETLKTFAEPSRAKENELEQIRADNVAAEAEQANELQGYNKSLSQLETISREI
QRFNEMDIGANCERCQQEIDTLDERIKSSNQHISKLQEDLIELDKEQDKVKAFERNITDN
IRYRTYVCEINELSEKMNDIDVAKAQEAVHKYDAEYHTAEKCLAKLKSDQAKLGGEIGMD
NNNLRDKTDERESEFKNIIQRHRAQLVKVKTVEIANQDLDKYAKALDQAIMKYHSHKMAE
INDTIHTLWQKTYQGTDIDNISIKSENENAKSNRSYNYRVVMMKDQVEMDMRGRCSAGQK
VLASIIIRLALAESFGTNCGILALDEPTTNLDKDNIDALAGSLAEIIKERRDQANFQLVV
ITHDEDFLNKLGQADVLDKYWRVSRNMQQKSIIERQRMV
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtatgactcacagctttcaaatgcattctgcagggttcagtcacatggcacaaaattt
cgagaggcagttgggatggacctcaaacctgaaactgctgagaaagacatcaacggtgtt
atccgtctggcggaaaagagtctgtcagatgctacacaacgttgcgccgaggtcaccaaa
gaaatgcaaacaagtcacacaaaattgcaaatgagcaagtccaagctagcatcaaccaag
gcggagctggaaagtctggaccgtaaggttaagcgcgcgacggaaggtgggaaggtctcc
accctaattgtagacaccgaagactcactccaagaagcacagagggatctggatggtatg
gggtttgtagtcgcatttcatgagggcctactcaagaaggccaaagataccaataagtgt
gggggttgccaacgaccatttcacagcaataatgaaatgtctgcttttgaagcctactgc
caaactacgatcgaaagattgcctgctaaaaaacgcaaaggggaggaagaattgaaagaa
tggcatgaacaattggaacgtttgaagaaggtcttacctttggaaatatctgcaaccaag
ctacgagatgtcgatatcccacacttgcaaaaggacatcaatgaacttgaatcaaaattt
gatgcttctaaccgaaaagctgaagaagcgcaggctgaggtagagaaatcaaaagatcag
attggtgaattggaattatgcaagcgctttgcggttgatatgagcaggatgtttggcgag
attgctgaactcaagtctgaaatcaagaaccttgagagagacttagaaagctctgggacc
accaggactgcagatcaggttcaagaacaactagatgatttgcagctcaaccttggggag
tcaaagagagagctcgagtcgttgattggtgatcgagaccgcagacgaacaacaattcac
aacttggaaaccgaaattcaccaattggaaatcagcttgaactcaaagcggcaacaaaag
aaagaaaaagaggcctttgaagttcagaaagagggtttgaaaaaagaaatcgttgagtta
gaggagaaggtgaagaccacagaggaaactttgaagacgtttgccgaaccgtcacgggcc
aaggagaatgagctggaacaaatccgcgcggacaatgtggcagcagaagctgaacaagca
aatgaactccaaggttacaataaaagtctgagtcaattggaaaccatcagcagggaaatt
caaagattcaacgaaatggacattggggcaaattgtgaacgatgccaacaagaaattgat
acacttgacgaaagaattaaatcttctaaccaacatatatctaagttacaagaggatttg
attgaattagataaagagcaagataaagtgaaggcttttgagcgtaacataactgacaac
attagatatcgtacctatgtatgtgagattaatgagttgtcggagaaaatgaacgatatt
gacgttgccaaggctcaagaagctgttcataaatatgatgccgagtatcatactgctgaa
aagtgcttggccaagttgaaatctgatcaagctaaattaggcggagaaattgggatggat
aacaataacttgagagataaaaccgacgaaagggaatcagagttcaagaatataatccaa
cggcaccgggcgcagttagtcaaagtcaagactgtcgagatcgcgaatcaagacttggat
aaatatgctaaagctctcgatcaagcaatcatgaaatatcattcccataaaatggccgaa
attaacgatacgattcatacattatggcagaagacttatcagggaacagatattgataac
atttcgatcaagtccgaaaatgaaaatgctaaaagtaatcgatcttataactatcgagta
gtaatgatgaaagatcaagtcgaaatggatatgagaggtcgttgttcggctggacaaaaa
gtcttggcatcaattatcatcagattagcattagctgaatcatttggtactaactgtggt
attcttgcacttgatgagcctaccaccaatttggacaaggataatattgatgccttggct
ggctcattagctgaaatcatcaaagaaagaagggaccaagcaaatttccaactggtagtc
ataacacatgacgaagatttcctgaataaactaggtcaggccgatgttttggataagtat
tggcgagtcagtcgaaacatgcaacaaaaatcaatcatagaacgacaacgaatggtataa
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integrated database retrieval system
