Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_022659
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Entry
Pst134EA_022659 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03022
Basal transcription factors
pstr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Pst134EA_022659
09124 Replication and repair
03420 Nucleotide excision repair
Pst134EA_022659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstr03021
]
Pst134EA_022659
03400 DNA repair and recombination proteins [BR:
pstr03400
]
Pst134EA_022659
Transcription machinery [BR:
pstr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Pst134EA_022659
DNA repair and recombination proteins [BR:
pstr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Pst134EA_022659
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
72032178
NCBI-ProteinID:
XP_047801385
LinkDB
All DBs
Position
12:complement(1615285..1618490)
Genome browser
AA seq
645 aa
AA seq
DB search
MGNNNKTSSSSLLTSSIVEAITSYKKKTGKLILSKTALKWIPKDGAGSGAEIISIEINRL
HSLFSSKEGGPKAILKIGAKLTTTTTTTTTGTDEAPVDESYNFAFISSDPHGDRDLFKTH
ISEIIVQNRAQIQIPPPPTTEGSKNPSNSNEIVPPRLDNKVVINPLEDWRLKKRVLQSHP
DLRQLHKEMVIGAQISESEFWHGREDLLFNEARLDNQKIGRSAQMVDPRPETTDNGEIRI
SITPQMIKDIFEQYPVVQKAYNENVPPLNDQTFWTRYFRSKLFNRHKSSARQSGDAVKED
EILDKYLDDEDDGVVPKNINQREINRLLDLNSTLEDHTETGNSDDWTMRPGTQRSSLPLM
RRFNEHSQRLLDSTLGKVPERRRGGGVIDGGDAGARNNYEEVDLEDLNNHKKPERIILDM
REQERYFEGSAVASNNNNNNHLKRKRTVEEDVEVVQIMAQRLTREWNLDLGSFKIRDLQL
TSATTIMLDNIAVRDQQQRGFNEASMPKDFLNQMVSTYTTTNEFLRQFWTAILPNPISIN
PTTTTLSSSSSSTTGKTKEEQEEEQNKLNLMMVKPTLTVEQKALKSQRMINFLSKTNERI
QNLINLSHSFENDVGFNKSNIVVAFNGLLKSVEIAQKYYSDRTSS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaacaataagacttcttcttcaagcttattgacgtcatcaattgtcgaagct
atcacatcctacaagaagaaaactgggaaattaatactaagtaagactgcactcaaatgg
atacctaaggatggagcaggcagtggagctgaaattatttcgattgaaatcaatcgttta
cattccctgttttcatcaaaagaaggtgggcccaaagctatactcaagattggagccaaa
ttgaccactaccaccaccacaactactactggaaccgacgaagcaccagttgatgaaagt
tataattttgctttcattagttcagatcctcatggagatagagatttatttaagacacat
atctctgaaattattgtccagaatcgagctcaaattcagataccaccaccaccaacaaca
gaaggatccaagaatccgagtaatagtaatgagattgtaccaccaagactagataataaa
gtagtaattaatccactagaagattggagattgaaaaaaagagtcttacaaagtcatcct
gacttgcgtcaattacataaagaaatggttattggggctcaaatctctgaatctgaattc
tggcacggtagagaagatttattatttaatgaagctagattagataatcaaaaaattggt
agatctgctcaaatggtagacccaagacctgaaactactgataatggtgagattaggata
tctatcactccccaaatgattaaggatatttttgaacaatatccagttgttcaaaaagct
tataatgaaaatgttcctcctttaaatgatcaaacgttttggactcgatatttccgatct
aaattatttaatagacataaatcatcggcacgtcaaagtggtgatgcagttaaagaggat
gagattctagataaatatttagatgatgaagatgatggtgttgttcctaaaaatattaat
cagagagaaattaataggttattggatttaaattctactcttgaagatcatactgagact
gggaattcggatgattggactatgcgtcctggtactcagagatcttcgttacctttaatg
agaagatttaatgaacattctcaacgactattggattcaactcttggtaaagtacctgag
agacgacgtggagggggagtgattgatggaggagatgcaggagcacgaaataattatgaa
gaagtggatttagaagacttaaataaccataaaaaaccagaacgaattatcctagatatg
agagaacaagaacggtatttcgaaggtagtgccgttgcatccaataataataataataat
catttgaaaaggaaaaggactgtggaagaagatgttgaggttgttcagatcatggctcag
cggcttaccagagagtggaatttggatttgggcagcttcaaaatacgtgatcttcagctc
acttctgctactactattatgcttgataatattgctgttcgtgatcaacaacaaagaggg
ttcaatgaagcttctatgcctaaagatttccttaatcaaatggtttctacatataccacc
acaaatgaatttctacgacaattctggacagccatcttaccaaacccaatctcaattaat
cctaccacaacaaccctatcctcttcctcttcctcaacaacaggtaaaacaaaagaagaa
caagaagaagagcagaataaattgaacctgatgatggttaaaccaactttaacagttgaa
caaaaagcacttaaatctcaacgaatgattaattttttaagtaaaactaatgaaagaatt
caaaacttaattaatctttcacattcattcgaaaatgatgtagggtttaataaatccaat
attgtagttgcttttaatggtcttcttaaatccgtggaaatcgctcagaagtattattct
gatcggacttcctcttga
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