KEGG   Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_022828
Entry
Pst134EA_022828   CDS       T09520                                 
Name
(RefSeq) hypothetical protein
  KO
K12828  splicing factor 3B subunit 1
Organism
pstr  Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pstr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Pst134EA_022828
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pstr03041]
    Pst134EA_022828
   03036 Chromosome and associated proteins [BR:pstr03036]
    Pst134EA_022828
Spliceosome [BR:pstr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    Pst134EA_022828
 Complex B
    Pst134EA_022828
 Complex C
   U2 SnRNP specific factors
    Pst134EA_022828
Chromosome and associated proteins [BR:pstr03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    Pst134EA_022828
SSDB
Motif
Pfam: SF3b1 TOR1L1_N PPP2R1A-like_HEAT HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG Adaptin_N Cnd1 RRP12_HEAT IFRD GNC1_N HEAT_Maestro Dopey_N DNA_pol_phi Condensin2nSMC
Other DBs
NCBI-GeneID: 72032347
NCBI-ProteinID: XP_047801560
LinkDB
Position
12:2421723..2427133
AA seq 1241 aa
MADDENQIEAEIQAEQNARLKQRDVSTQRTDTNKASLTGGPSYDLDIYGGKSRFEGYDKS
IQVGGRNDDHMDEDEEDRPTRMLDSYTAPKQFLQELADDAEDAEDPLLSALKAKEIQSRQ
SDYHNRRFDRDPGGAVGSDPFAAQSKDKTQEEGSYKEAMRRAELEREEVRVLKKIKEQQD
EKSDQMDVDHPERSKTPTMEEPPTPVSSTGRKKRRWDVADPSASTTSDDSSATTPSTGEW
SNTDGSAPSAKKTRSRWDQTPAPGTADGATPRRSRWDQTPVMNNGAATPMAGGQFGQTPL
HVSGANGLAMLGGEMSELDKRNRPLSDEELDAQLPSEGYEIVTPPAGYAPIRTPARKLMQ
TPANSSGGFTMQEDSAGLGGSMSLAPELPTEIEGVGQLQFFKPEDAQYFGKILSGEQDES
SLTIEELKERKIMRLLLKIKNGAPPMRKTALRQITDKAREFGAGPLFDKILPLLMERTLE
DQERHLLVKVIDRVLYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAG
LAHMISTMRPDIDHVDEYVRNTTARAFSVVASALGIPSLLPFLKAVCKSKKSWQARHTGI
KIVQQIAIMMGCAVLPHLKNLVESISHGLEDEQQKVRTMTALGIAALAEAASPYGIESFD
SVLKPLWTGIRKHRGKGLAAFLKAIGFIIPLMDAEYANYYTKEVMVILIREFQSPDEEMK
KIVLKVVKQCSATDGVQPQYVKVEILPQFFANFWVRRMALDRRNYRQVVETTVELANKAG
VTEIVSRIVNDLKDESEPYRKMVMETIEKVISALGANDIDERLEVQLIDGIIYAFQEQTV
EDIVMLEGFGTVVHALGIRVQPYLTQIVSTILWRLNNKSAKVRQQAADLTSKLAVVIKQC
GEDQLLSKLGVVLFEQLGEEYPDTLGSIIAAEASIANVVGMTQMSPPVKDLLPRMTPILR
NRHEKVQEASINLIGRIADRGAEFVSAREWMRICFELLDLLKAHKKAIRRAAVNSFGYIA
KAIGPQDVLSVLLTNLRVQERQSRVCSTVAIAIVAETCGPFTCIPAILNEYRTPELNVRN
GCLKSLSFLFEYIGEMGKDYINSVATCLEDALTDRDLVHRQTACSIVKHLALGTAGLGQE
DANLHLMNLVWPNCFETSPHVIGACMDAIEAMRVAVGPGVVLLYTLQGLFHPARKVREVY
WRIYNSNYLGAADAMVPFYPNLSDASDDVRDYSRDMLLAWI
NT seq 3726 nt   +upstreamnt  +downstreamnt
atggccgatgatgagaaccaaatcgaagccgaaatccaggcggagcagaacgcccgtctc
aagcagcgcgatgtatcgacccagcggaccgataccaacaaagcatctttgaccggcggc
ccttcctacgacttggacatctacggtggcaagagccgtttcgaaggctacgacaagagt
attcaagtaggtggacggaatgacgatcacatggatgaagatgaagaagatcggcctacc
cgaatgctagattcatacactgcgccaaagcaatttttacaggagctagctgatgatgcc
gaggacgcagaagacccccttctctcagccctgaaggctaaagaaattcaatcccgtcaa
tccgattaccacaacaggcgcttcgatcgtgatcctggtggtgctgttgggtcagatccg
ttcgcagctcagtcgaaagacaagactcaagaagaaggtagctacaaggaagcaatgcgt
agagccgaattagaacgagaagaagtacgggtgttgaaaaaaatcaaagaacagcaggat
gagaagtctgaccaaatggacgtcgaccaccctgaaaggtctaaaacgcctacgatggaa
gaaccaccgacgcccgtctcctcaaccggtaggaagaagcgtcggtgggatgttgctgat
cccagcgccagcaccacttcagatgattccagtgcaacaactccatcaactggtgaatgg
tccaacaccgacggatctgcgccttcagctaaaaaaacacgatcgcggtgggatcaaact
ccagcacccggaactgccgatggtgcaacacctagaaggtctcgatgggaccagactcct
gtcatgaacaatggggcagccaccccgatggccggtgggcaattcggccagactccactc
catgtcagtggcgctaacgggctcgcgatgctcgggggagagatgtcagaacttgacaag
cggaatagaccgctatcggacgaggagctggatgcacaactcccatctgaaggatacgaa
attgtgactccacccgctggctacgctcctatacgcaccccggcccgtaagctgatgcaa
accccagccaacagcagtgggggcttcaccatgcaagaagactcggccggtctcggagga
tcgatgagcttagctccagagcttcccaccgaaatcgaaggcgttggtcaactgcaattc
ttcaaaccagaggatgcccagtatttcggaaaaatcctatcgggtgaacaagatgaatct
agtctgacgatagaagagttgaaggagagaaaaatcatgcgcctgttattgaaaatcaag
aatggcgctccaccgatgcggaagactgctctacggcaaatcaccgataaagctagagaa
tttggcgcgggtccactgtttgacaaaatcttaccccttctcatggaacgaacccttgaa
gatcaggagcgacatttgttggtaaaagtgattgatcgtgttttgtacaaactagacgac
ttggttcgcccctacgtacacaaaattcttgtggtcatcgagccactgttgatcgacgag
gattactacgctcgagtagagggacgagaaatcatttccaacttatcgaaggctgctgga
ctcgcccacatgatttcgactatgcgacctgatattgatcatgtggacgagtacgtccga
aacacgaccgcaagagctttctcggtagtggcatctgcactgggaatcccctccctatta
ccattcttgaaggcagtatgtaagtctaaaaagtcctggcaggctcgacacacgggtatc
aagattgttcagcagatcgccatcatgatgggatgtgcggtcctcccccatctaaaaaat
ttggttgaatctataagtcatggattggaggacgagcagcagaaggtgaggacaatgacc
gccttagggattgctgccctcgcggaagctgcctctccctatggaatcgagagtttcgat
agcgttttgaagccgctgtggaccggtattcggaaacatcgtggcaaagggctcgcggcg
tttttgaaggcgatcgggttcatcattcctttgatggatgctgagtatgcgaactactac
actaaagaagttatggtgatcttgattcgagaatttcaatctcctgacgaagaaatgaag
aaaatcgtactcaaagtcgtcaaacaatgctcagcaacagatggtgttcagccccagtat
gtcaaagtcgaaatcttgcctcaatttttcgccaacttctgggtacgaagaatggcattg
gatagacgaaactaccgtcaagttgtcgagacgaccgtcgaactagccaataaagctggg
gtaacggaaattgtgagtcgtattgtcaacgatttgaaggacgagtctgagccataccga
aagatggtaatggaaaccatagagaaagtcatatcggcacttggcgcaaatgatatcgac
gaacggctcgaggtacaattgattgatgggatcatctatgccttccaagaacaaaccgtg
gaagatattgtgatgcttgaaggatttggaacagttgtacatgccttaggaattcgcgtc
caaccttatcttactcaaatcgtctctacaattttgtggagattaaacaacaaatcagcc
aaagtccgtcaacaggctgctgatttaaccagcaaactggcagtggtgatcaaacaatgt
ggggaagatcagctactatctaaacttggagtagttttattcgaacagctcggcgaggaa
tatcccgacaccctagggagtataatcgctgctgaagcctctattgccaatgtggtgggt
atgacgcaaatgagcccacctgtcaaagaccttctcccacgtatgacgcctatcctccga
aacagacacgagaaagtacaggaagcgtcgatcaacttgatcggtcgaatcgccgatcgt
ggagctgagtttgtctctgcgcgtgaatggatgcgaatctgtttcgagttgctcgatcta
ctcaaggcgcacaagaaagccatccggcgggccgctgtcaactcttttggttacatcgca
aaagctatcggtccgcaggacgtcctgagtgttctactcacaaacttgagggttcaagag
agacagagtcgtgtctgttcaacagttgcaatagctattgtcgcggaaacctgtggtcct
tttacatgcatacctgctattttgaacgaatatcgaactcctgagttgaacgtgcgaaat
ggatgcttgaaatccctgtcgtttttattcgaatacattggcgagatgggcaaagactat
atcaattcggttgctacctgcttagaggacgctctcacagatcgagatcttgtacatcgc
cagacggcttgttcgattgttaaacatcttgctctgggtacggctgggctggggcaggaa
gatgcaaacctccacttgatgaatcttgtttggcccaattgctttgagacctcaccgcat
gtcattggtgcttgcatggatgccattgaggctatgagagtagcagttgggccgggagtc
gtattgctctatactctacaaggactcttccatcctgctcgcaaagtacgagaagtgtat
tggcgaatttataactccaactatcttggagctgccgatgcgatggttcctttctatcct
aacttatcggatgcatctgatgacgtaagggactacagtcgagatatgctcttggcttgg
atttag

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