Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_024564
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Entry
Pst134EA_024564 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Pst134EA_024564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pstr03041
]
Pst134EA_024564
Enzymes [BR:
pstr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Pst134EA_024564
Spliceosome [BR:
pstr03041
]
Complex C
Other components
Step II factors
Pst134EA_024564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
S1
AAA_22
AAA_19
ABC_tran
AAA_30
nSTAND3
Flavi_DEAD
GIPC1_GH2
T2SSE
nSTAND6
SRP54
Ploopntkinase3
AAA_16
nSTAND_NTPase5
NB-ARC
PhoH
TsaE
AAA_7
Motif
Other DBs
NCBI-GeneID:
72033260
NCBI-ProteinID:
XP_047800903
LinkDB
All DBs
Position
13:2616988..2621641
Genome browser
AA seq
1234 aa
AA seq
DB search
MEDDFEKLERLSLVNSITKELHNHVGLQDSTLAEFLISLHEQSTSFENFKIKLQEIGAEF
PESFITNMDRLVTSLHPKYKKKKVSTGEGKGKEKGTDPVEDEEELERKKRRAQALFPALA
LPDSSWEPSFVADPKESKGKNVASADDLMNEFENVARRHRELRAVPEEDEDEGNRASKLP
RRDRSASRERGRRSPEPRSSRFRDDNPSGGSGGGGGGFNDRGRQRDNGYTNRGNSGNLDS
GGMDDRGRQRDNGYANRGNSRNLDSRPVLYKIYDGTVASIKDFGCFVTLKGISGKAEGLV
HVNAIAAGRVNHPSDLVSRGQPVKVKVVSMAGERIGISMKDVDQNTGADLTPHLRIKTDA
EMAEEEAQYAARHVNHSAGAGFADDNRSSSARRLTSPERWEIKQMIASGAASASDYPNLD
DDLTTPGSTNGMAAAATAEEELDIEMREDEAPFLKGGHRRVLDLSPVKIVKAPDGTLNRA
ALAGAGLAKERRELRQQEANERADAETQDTSTAWLDPAAKPHERLFAQDARDNTMGKKQE
ESGWKQATFNHATTYGKITSLSITEQRASLPIYKLRDALVKAVKENQILVVVGDTGSGKT
TQMTQYLAEEGLADEKKIACTQPRRVAAMSVAKRVAEEVGCRLGQDVGYTIRFEDCTSPE
TKIKYMTDGMLQREALIDPNLSNYSVIMLDEAHERTIATDVLFGLLKKSILRRPDLKLIV
TSATLDAEKFSKYFYSCPIFTIPGRTYPVEVLYTKEPESDYLDAALITIMQIHISEPPGD
ILLFLTGQEEIDTSAEILYERMKALGSHVPELIVLPVYSALPSEMQTKIFDPAPPGARKV
ILATNIAETSITIDGIYYVVDPGFVKQKAWDPRLGMDSLVVTPISQAQARQRSGRAGRTG
PGKCYRLYTEAAYRNEMLPTSIPDIQRQNLAHTILMLKAMGINDLLNFDFMDPPPQQTMI
TALENLYALSALDDEGLLTRLGRKMADFPMDPELSKMLIASVDLGCSEEVLTIVAMISGA
TNVFYRPKEKQAQADAKKAKFHQPEGDHLTLLAVYDGWKNNKFSNPWCHENYIQSRAMRR
AQDVRKQLLGIMDRYKHDIVSCGTNYDRVRRAICSGYFRHAAKKDPQEGYKTLVEGTPVF
IHPSSALFNRAPEWIIYHELVLTTKEYCRDVTAIEPKWLTEVAPTFFKVADAKTMSKRKR
NERVQPLFDRFAKSENEWRISKVKRSTRTSQTFG
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgacttcgagaaactagagaggctctcgctggtcaacagtatcacgaaggaa
cttcataaccatgtcggacttcaggatagcaccttggctgaatttctcatctcacttcac
gagcaatcgacttcattcgagaatttcaaaatcaaactacaagagatcggggctgaattc
ccagaaagtttcatcactaatatggatcgactggtaactagtttacatccgaaatataag
aaaaagaaagtctcgactggcgaaggaaagggtaaagagaaaggtactgatccagtggag
gacgaagaagaactcgaacgaaagaagagacgtgctcaggccttattccccgcattggca
cttccagatagctcctgggagccaagcttcgttgctgatccgaaggaatccaaagggaag
aacgtcgcaagcgcagacgatttgatgaacgaatttgaaaacgtggccagacgacacagg
gaattgagagcggttccagaagaagatgaggatgaaggaaatcgtgcctccaagctgccg
agacgggatcgatcagcaagccgtgaaagaggaagacgatccccggagcctagatctagc
cggttcagagatgacaatcctagtggcggcagcggtggtggtggtggtggcttcaatgat
cgtggacgacagcgtgataatggctataccaacagaggaaactcgggaaatcttgatagt
ggtggtatggatgatcgcggacgacagcgtgataatggctatgccaacagaggaaactcg
agaaatctagattctcgacctgtactttacaagatttacgacgggaccgttgcttcgatc
aaggattttggttgttttgtcaccctgaaaggtatctcagggaaagctgaaggcctagtt
catgttaatgcaattgctgctggacgagttaatcatccatccgatctagtttcaagaggg
cagcccgttaaagtcaaggtagtttcaatggcgggcgagcggatcggaatctcgatgaaa
gatgtcgaccaaaatactggtgcagatttaactccacatctacgaatcaagacagacgct
gaaatggcagaagaggaagcgcaatacgcggctcgacacgtcaaccatagcgccggagcc
ggttttgctgacgacaaccgttcctctagtgctcgtcgtctaacctcacccgagcgatgg
gagatcaaacaaatgattgcctcaggggcggcgagcgcatccgattatccaaacctcgat
gacgatttgactactccaggtagtacaaacgggatggccgcagcggcgaccgcagaggag
gaactcgatatcgagatgagagaggatgaggccccattcctgaaaggtggccatcggaga
gtgctcgacttgagtcctgtcaagattgtcaaggctccagatggcacgctcaacagagcc
gcactggctggtgcaggtttggcgaaagaaagacgcgagctacgtcaacaagaagcaaac
gagcgagcggatgcggaaactcaagacaccagtacggcttggctggatccagcggccaaa
ccgcacgagcgactattcgcccaagacgctagggataataccatgggcaagaaacaggaa
gaatctggttggaaacaagctacattcaaccacgcgacaacatacggaaaaatcacttct
ctcagtatcacggaacagcgggccagtttaccaatttacaagttacgtgacgcgctcgtc
aaagctgtcaaggagaaccagatccttgtagtggttggagatactggatcgggtaagact
acacaaatgactcaatatttagccgaggaaggtttggcggatgagaagaaaatcgcatgt
acccaacctcgtcgagtagccgcgatgtcggtagccaagagagtagctgaagaagtcgga
tgtaggttaggtcaagacgttggttatacaatccggttcgaagattgtacaagcccagaa
acgaagatcaagtacatgaccgatggaatgctccaaagagaagccttgattgacccaaat
ctatcaaactattccgtcatcatgctggatgaggcacatgaaaggacaatcgccactgat
gtgctttttggacttctcaaaaaatcaatcctgcgtcgaccggatcttaagttgatcgtt
acttcagctacactggatgccgagaaattttcgaaatacttctattcatgtccgattttc
acgattcccgggagaacttatcctgtcgaagtgctgtacaccaaagagcctgaaagcgac
tatctggatgcggcgctgataacgatcatgcaaattcatatttctgagcctccaggagat
atcctactgttcttgactggacaggaagagatcgacacttcagctgagatcttgtatgaa
cgaatgaaagccctaggatcacacgtacctgaactgatcgtcttaccagtatattcggcc
ctcccttctgaaatgcagaccaagatcttcgatccggcacctcctggcgcccggaaagtg
atcttagctactaacatcgccgaaacgtcgattacgatcgacggcatctactatgtcgtc
gatcctggattcgtcaaacaaaaagcatgggatcctcgactgggaatggattcattagta
gtcactccgatctcacaagctcaagctagacaacgttctggtcgtgctggtcgaacaggt
ccgggtaaatgttatcgattgtatactgaagcagcttatcgaaacgaaatgctaccaact
tcgatacctgatattcaacgtcagaatctggcccatacaattctcatgctcaaagctatg
gggatcaatgatctcttgaacttcgacttcatggatcctcctcctcaacaaactatgatc
accgctctcgaaaatctttatgcactctctgctctcgatgatgaaggtctcttaactcgt
ttgggtcggaagatggctgattttccgatggatcccgaattatcaaagatgttgattgca
tcggttgacttgggatgttcagaagaagtcttgacgatcgtggccatgatcagcggtgcg
acgaatgtgttctatagacccaaggagaaacaagctcaggcggatgctaagaaggctaaa
ttccatcaacctgaaggtgatcatctcacccttctcgcggtctatgatggttggaagaat
aataagtttagtaacccttggtgccacgaaaactatatacaatctcgagctatgagaaga
gcacaagatgtacggaaacaattgttagggattatggatcgatataaacatgatattgta
tcatgtggaacaaactatgaccgtgtccgtcgagctatctgttctggttacttccgacat
gcagccaagaaggatccgcaggagggatacaaaacattagtcgaggggacaccagtcttt
atacatccctcttcagccctattcaatcgtgcaccagaatggatcatttatcacgaattg
gtcctaacaactaaggaatattgtcgtgatgtgactgccatcgaacctaaatggcttacc
gaggtcgcacccaccttcttcaaagttgccgatgctaaaacgatgtctaaacgcaaacga
aacgagagagttcaacctttgttcgacagatttgccaagagcgaaaacgagtggcgtatc
tcaaaggtcaaacgcagcacccgtaccagtcaaacttttggttga
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integrated database retrieval system
