Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_025767
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Entry
Pst134EA_025767 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pst134EA_025767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_025767
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
Pst134EA_025767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
TPR_16
TPR_1
TPR_17
TPR_19
TPR_11
TPR_14
TPR_CcmH_CycH
TPR_22
TPR_7
ARM_TT21_C
ARM_TT21_N
DUF4919
COG4_N
Motif
Other DBs
NCBI-GeneID:
72033796
NCBI-ProteinID:
XP_047800120
LinkDB
All DBs
Position
14:complement(2135190..2140940)
Genome browser
AA seq
1575 aa
AA seq
DB search
MASLKAQLKAARDAITASDWEKAETLAQAALAIDNQSYNAYVFLGLAQLNLKKVSESEAA
YRAAIGIDQAHPLAWQGLISLYEQQHDIDQLIAEAQNLMHIWNEKGEAAKLGEMILRMMS
YPQKSRKQSVAILSQVLSDSPFYLLLSTLPEPDLTNPEASPLMKLQLIMANTLPTLYEII
ELIQNEQDDTITREITKRRTRLSSVPKTAAQTRAEVINEIYPSSLLPKFWQQVLDHPMAN
DEARRDVEAKLLTFYMDWLESLPSPSASELPNPSKRIGISPTAEPKPSTSSTKQEDKASV
RHKIEDLARGQAILKIPNQQAWDIVLDWGEVLPDVGSADSCGFLKNLPEAMPDAPLSTLV
LAFRQIHKETEEEEDLAFEDPLEQIELSFEGAQEHSILSHVLAASVYFDLKEWSTVIQIA
QGGLTKLAKLEKKIGKRLSVFKRRLTTHLACALTYDNPPVHHLRATRYLDAILSDEPDNG
HVLMAKACILRHSKDWQLANEFYSRSLEASPHLTAHERLDTRSEQAWCLFGIGHINLAIQ
KLEDIIEGFEQLAQQDTEVQEVNHNVAQSWYRLGRCKWALSHPADPNETGSNITDLEGMT
HSAYSCFIKSIKCDTSIASSFTYLGLYYDEQNDHTRSSKCFQRAFELDATQEVAAFKLAS
QFAEDRQWDLVAVVTKRLLFGGVTQNAQPTNDEDEPTNLTNLASYQQHVWAWKAAGVVEL
SEGKFTAAINTFQRAIRCSPNDYQILLKLGLAYQGAGKHVAALKSFIAARQLLNTPTEVT
SPANPGESSAWYVDFCIGDSQRQIGLLEPAIKNLSKIVANRQEEFGVKIILAETKYTMGL
KNSEQGSFAEAERELISCLDIVHDILEQTKSRLVTKAGWKIVGNVFTEFSRWNRAIPITT
FLADAGENDSSERLRVHLSYFVNLAAKMNVDSILINVKSVTCLETSAILSENGSPGVFLL
VSTLAFKVRLVIELSDSQKNSTAEAWSDLAISLGGLSRWLDLTSSKFSSSDPSSFFKTRM
GSQATISEAVHCIKAGLQMNSFSSGAWNTLGVLTFTLNPRLSQHAFIRSVELMPKNHIAW
TNLGFFYVTHSDLELANEAFERAQLIEPDWSLSWMGRALIASLSDQQDKAGELVEHAYSL
SLGSITTIESCCATVALKTFTNDAQKSSQHTNSLIAPMLAAEKLLKRYPKDPTFLNLHAL
ISESMGNFDEAARSLERSAELLEAVYEVTESIEIEQRYMLANLNLGRIRLRQKNYEEAIM
VHETVLSLRPPFDKTSEPVECALKSTIIRAQAACQIAIARHFLQDHEKALTVLDEALREL
YAVQQDKSLRLSKVLAPYSSAVSGLIARVLWSQPNKSKARGLLSETISKNSSEKFIDFDL
ISSFLAITILEGGSDKTLQAVLDTKYASNEEPVEHNLGKGGEVLNNQSSDEAQNPRKEDV
EIISRLEELILRKRQNSKITRDPKSETNTILNFLEFTIKVLNELPSCNEDAFVKSFETVK
TVLGSCIRELRETEVDKQLIKQQAIIFKSLDEEQLPAPSGLTNRTNNHPDQPGGHTEEFD
DVQTISLSEQLNFLV
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctcaaagctcagttgaaggcagcacgggacgcgattacggccagcgattgg
gagaaagctgaaactttggctcaggcggcactggcgattgacaatcagtcctataacgct
tacgtgtttttgggtctcgctcagctgaatttgaagaaagtatccgaatctgaagctgcc
tatcgtgcagcgattgggatcgatcaagcccatcctctcgcgtggcaaggcttgatttct
ttgtacgagcaacaacacgatatcgatcagctaattgctgaagctcaaaatctgatgcat
atttggaatgaaaagggtgaagctgcaaagcttggagagatgattctaaggatgatgtca
taccctcaaaaatcacgtaagcagtctgtcgctatcctctctcaggttttgagtgactcg
ccattctacttgttactatcgacgcttcccgaaccggatcttacgaatcccgaggcctcg
ccccttatgaagcttcaactcattatggccaacaccttacccaccttatacgaaataatc
gaattgattcaaaatgagcaggacgataccatcactcgcgaaatcaccaaaagacgcact
cgattatcatcggtcccaaagactgccgctcaaacaagggcggaggtgatcaatgaaatc
tatccctcaagcttactacctaaattttggcagcaagtgttggatcatccgatggctaac
gatgaagcaagaagagatgtcgaggcaaagctattgacgttttacatggactggcttgaa
tccttaccatccccctctgccagtgagctgccaaacccctccaagcgcataggaatctct
cccacggccgaaccgaagccttccaccagttcaacaaaacaggaggataaagcttcagtt
cgccacaaaattgaagacttggctcgggggcaagcgatcctcaaaattccgaaccagcaa
gcttgggatattgtactcgattggggcgaggttctacctgatgtcggatcagcagactct
tgcgggtttcttaaaaaccttcccgaagcaatgcctgatgctcccctatcaactcttgtt
ctagctttccgacagattcataaagaaactgaagaggaggaagatctcgcgtttgaggat
ccgctcgagcagatcgagctttcattcgaaggcgcacaagaacattcaatcttatctcat
gttcttgctgcgtcagtttacttcgacttaaaagaatggtcaacagtcatccaaatagct
caaggaggtctcaccaaattggctaagcttgagaaaaagattggaaagcgcttatcagtt
ttcaagcgacggctgacaactcacttggcttgtgctctgacctatgacaatccacccgtt
catcatctccgagctactcgctatctggatgctatcctgtccgatgaaccggataatggc
catgtcttgatggccaaggcgtgtatcctaaggcatagcaaagattggcagctagctaac
gagttttactcgcgttccctcgaagcttcacctcatttgacggcacacgaaaggctcgat
acacgatcggagcaggcctggtgcctgttcggaatcggtcacatcaatctcgccattcaa
aagttggaggatatcattgaaggttttgaacagctagctcaacaggatacggaagtccaa
gaagtcaatcacaatgtggctcaaagttggtatcgcttagggaggtgtaaatgggctctg
agtcatccggcggatccaaatgaaacaggatctaacataaccgaccttgaaggaatgacg
catagcgcctatagctgtttcatcaaatctatcaaatgcgacacctcgattgcttcttcc
ttcacctacctgggattatattacgatgagcaaaatgaccatactcgatcttcaaaatgc
tttcagagagcgtttgagctggacgctacacaagaagtcgctgctttcaaattagcctca
cagtttgccgaagaccggcagtgggatcttgtcgcagttgtgaccaagcggcttctcttt
ggaggtgtaacgcaaaatgctcagccaacaaacgacgaggatgaaccaaccaacttgaca
aatctcgcgagctaccagcaacacgtctgggcatggaaggcagcgggagttgtcgagttg
agcgaaggcaaatttaccgctgcaattaacacttttcaacgtgctattcgatgctcaccc
aacgattatcagatcttgttgaaattaggcctggcttaccaaggcgctgggaaacacgtc
gccgccttgaagtcgttcattgccgctcgccagctacttaatacaccaactgaagtgacc
tcacccgctaatcccggagaatcatctgcttggtatgtagacttttgcattggtgattct
cagaggcagataggcctccttgagcctgcgatcaaaaacttaagcaagatagtcgcaaat
cgccaggaagaatttggtgtcaaaatcattttggccgaaaccaaatatacgatgggcttg
aagaattcagaacaggggtcctttgcggaagcggaacgtgaacttatatcctgcctagac
atcgttcacgatatactagaacaaactaaatctagattggtaacgaaggcgggttggaag
attgtcggaaacgtatttactgaattttcccggtggaaccgtgcaattcccattaccacc
ttccttgctgatgcgggcgaaaatgactcaagcgaaagattgcgggttcacctttcgtat
tttgtcaatctcgccgcaaagatgaatgtcgacagtattctcatcaatgtcaaatctgta
acttgtttagagacgagcgcgattctttctgagaatgggtctcctggagtattcctttta
gtatccacccttgctttcaaggttcgcctggtcatcgagctatcagacagtcagaaaaat
agtacagcggaagcttggtcagatctggcgatttcattaggaggtctaagtagatggctt
gatttgacttctagcaagttttcctcaagcgatccgtccagctttttcaagactcgaatg
ggttcgcaagctacgatatctgaagcagtacattgtatcaaagcagggttacagatgaac
tctttcagttccggagcttggaataccttgggtgtcttaaccttcaccttgaacccaaga
ctatcgcagcatgcattcatcagatccgtcgagcttatgccgaaaaatcatattgcttgg
actaaccttggcttcttctatgtgacccactctgacctggaactagcgaacgaagctttt
gaaagagctcagttaattgaacccgactggtcgttatcttggatgggccgagctttgata
gcttccctgagtgaccaacaggacaaagccggcgagctagttgaacatgcttacagccta
tctctcggaagcataactaccatcgagtcttgttgtgccacagtggcgctgaaaacgttc
accaatgatgcacaaaaatcctcacagcacaccaactcgcttattgcaccaatgttggca
gcagaaaagttattgaagagataccctaaggatccaacgtttttaaatctccatgcactt
atctcggaatctatgggaaactttgacgaggcggctcgaagtttggaaagatcagctgag
cttctagaggcagtctacgaagtgaccgagtcgatcgaaattgaacagcggtacatgttg
gccaacttgaatcttgggaggatcagattacgacagaagaattatgaggaagcaattatg
gttcacgagactgttcttagcttgaggcctccatttgataagacttcggaacctgtcgaa
tgtgctctcaaatcaacaatcatccgagctcaagcggcttgccagatcgcaattgccaga
catttcctgcaagatcatgagaaggctttgactgtcctcgatgaagctcttcgtgagctg
tacgccgttcagcaggacaaatctttaaggctctctaaagtgttggcgccctactcatct
gctgtatcaggactcattgctagagttctttggtctcaaccaaataagtcgaaggccaga
ggattattatcagaaacaatttcgaaaaattcatctgagaaatttattgatttcgattta
atcagttccttcttggctatcaccattttggaaggagggtcggacaaaacacttcaggcg
gttctcgataccaagtatgcatccaatgaggaaccggtagaacacaatctggggaaagga
ggagaagttctgaacaaccaatcgagcgatgaagcccagaatccccgcaaggaagatgtg
gaaatcatatccagacttgaagaactgatccttcgaaagagacaaaatagtaaaatcacg
cgggaccccaaatcagaaaccaacacgatactcaactttttggaattcacgatcaaagta
ttgaacgagctaccgagctgcaatgaagatgcttttgtcaaatcctttgagaccgtcaag
acagtcttaggcagctgtatcagggagctcagggaaactgaggtcgacaaacaattgatc
aaacaacaagccatcattttcaaatcgcttgacgaagagcaattgccagctccttctggt
ctcacgaatcgcactaacaatcaccccgaccaaccgggtggccacactgaggaatttgac
gatgttcaaacaatctcgctatctgagcagctaaatttccttgtttga
DBGET
integrated database retrieval system
