Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_027105
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Entry
Pst134EA_027105 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pst134EA_027105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_027105
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Pst134EA_027105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
72034552
NCBI-ProteinID:
XP_047799665
LinkDB
All DBs
Position
15:complement(2705592..2707088)
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AA seq
269 aa
AA seq
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MEFSVEQITRLQPNLISKTRADGRAALQARTSQSHSAGITSAHGSTIYSTGNTSVVCALK
LEIATPESSKPNQGFIVPNIDLGPMCSPKYRSGPPNDESQILSSRLKDILTSSGFLSLDS
LVIHPNKFVWVIYVDIVCLSNDGNLFDAIFNSTFNTLKTVKIPRVKFDQDRNQVILSDPS
KPDLIPLEIKDVLKAYSFAIFNQEKIWIDPTGFEEDTLCPGILHLIIDQDYQFRYVNYLA
PSSSINHEDSPIIFSDMLRKCLDLVKGSL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggaattctcagttgagcagatcactagattacagccaaatttgatcagcaagacaagg
gctgatggaagggcagcactccaagcacgaacaagccaatctcactctgctgggatcact
agtgcccatggttcaaccatttattcgaccggaaatacctccgtagtatgtgctctcaag
ctcgagattgctactccagaatcttctaaaccaaaccaaggattcatcgttcctaatatc
gatctaggacctatgtgttctcctaaatatcgctctggtccacctaacgatgaatctcaa
atcttatcttccagacttaaagacatcctaacatcctctgggttcttgtctctagattca
ctagtcatccaccccaataaattcgtctgggttatttatgtagatatagtttgtttatca
aacgacgggaatctattcgatgctatctttaactctacttttaatactctcaaaactgtt
aaaataccgcgagttaaattcgaccaagatcggaaccaagtcatcttatcagacccatcc
aaaccagatctcatccctctcgaaatcaaagatgttctaaaagcgtacagttttgcgatc
ttcaatcaagagaagatttggatagatccgactggttttgaagaagatactttatgtcca
gggatcttacatttaatcattgaccaggattatcaattcagatatgttaattacctcgcc
ccttcttcgtctatcaatcatgaagactctcctattatcttttcggatatgttgaggaaa
tgtttggatctcgttaaaggttctctttaa
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