Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_027832
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Entry
Pst134EA_027832 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K12597
protein AIR1/2
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pst134EA_027832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_027832
03016 Transfer RNA biogenesis [BR:
pstr03016
]
Pst134EA_027832
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
Pst134EA_027832
Transfer RNA biogenesis [BR:
pstr03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
Pst134EA_027832
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
zf-CCHC_2
eIF3g
Motif
Other DBs
NCBI-GeneID:
72034757
NCBI-ProteinID:
XP_047798711
LinkDB
All DBs
Position
16:744972..746150
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AA seq
296 aa
AA seq
DB search
MEPPIVPDVQSEPDRIPTTKRYWKESNGQLCSICLESDHQARNCSHQLCLTCGAIDEHIT
RQCPVSLVCHSCGSRGHLSRHCPSSSRVAGSRCARCDSTIHLTLNCPSIWRAYDEESNDR
PKRVLRACYYCGDTGDHFGDECPFRRSSLHTEPSAFSDRSIPKRDSHSTRHQQPHRSRRD
SSPRHRDSDRHRDGRRHDNYRSHDPPPSYKKYNNRSGRTDKAAYARRAETDEEEDWFSRR
NQRENHKKSGSSSRSSGGPSRSSGVPSNSSGASCRPSGSKSKSSRIGGSYKGGYIK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggaacccccgatcgtacctgacgtccagagtgaacccgaccggatcccgacaacaaaa
cggtattggaaagaatccaatgggcagttatgctcaatttgtcttgaatcggatcatcaa
gcacggaactgtagccaccagctttgcttaacctgcggtgcgatcgatgagcatatcact
cgacaatgtccggtgagcctcgtttgccatagctgcgggagccgaggccatctatctcga
cattgcccatcttcttctagggtagctggatcgcgctgcgcgcgttgtgactcgaccatt
catctcacacttaattgcccttccatatggagagcgtatgacgaagaatccaacgaccgg
cctaagcgagtcctgcgagcctgttattactgtggtgatactggtgaccactttggagac
gaatgtccatttcgaagatcgagtctacatactgagccttctgcattttcggatcggtca
atccccaaacgagatagtcattcgacccgacatcagcaaccccatcggtctagaagggat
tccagcccgcgtcatagggactctgaccggcatcgcgacggaaggaggcatgacaactat
aggtcacatgaccctccaccaagttacaagaagtacaacaatcgatccggtcgaactgac
aaagctgcctacgcgcgacgggccgaaaccgatgaagaagaggattggttttccagaaga
aatcagagagagaaccataagaaatccggttcttcctctagatcttctggcggtccttct
agatcgtcgggcgttccctctaactcgtctggcgcttcttgtagaccgagtggatctaaa
tccaagtccagtagaatcggtggatcctacaagggaggttacatcaaatga
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