Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_028041
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Entry
Pst134EA_028041 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K24755
WD repeat-containing protein 76
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pstr04121
]
Pst134EA_028041
03036 Chromosome and associated proteins [BR:
pstr03036
]
Pst134EA_028041
03400 DNA repair and recombination proteins [BR:
pstr03400
]
Pst134EA_028041
Ubiquitin system [BR:
pstr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
Pst134EA_028041
Chromosome and associated proteins [BR:
pstr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
Pst134EA_028041
DNA repair and recombination proteins [BR:
pstr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Pst134EA_028041
DSBR (double strand breaks repair)
Other DSBR factors
Others
Pst134EA_028041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
72034965
NCBI-ProteinID:
XP_047798936
LinkDB
All DBs
Position
16:1833664..1836237
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AA seq
572 aa
AA seq
DB search
MAVLTEYERQRLENIKKNQSLLSSLAIKSVGPAAKKGQKRPSSSTSTPTKKRSRQSTGTD
SLIPAKRHVTRSSVRLGGVTLDRVELQSRFEKQEEDLELERKKEDELKHADRPLVVENSK
AGPSSSLTSELFTSLATSILSKPIKTMKQDEVNLDYSPGKDADYDRLTNELNGLQLKAVN
KVCPNRIYSMTFHPDSSKSLLFMGEKFGGVAIWDALGNHRHSGVKSEDVEDEDHKSASST
NTAEGVSKRDVKPIKPEEQEEEDDDDQPEYVEGTSYFIQAHARHSAVSAIQVHPTDPHLI
YTSSYDGTIRELNFESQKSVEIVDAEVLNSDEETLFSAFEFANNGHEIWASDNSGGIVHR
DLRLPKLNARRWQISKKKIGCLSLCPNSGDRLAVTAGLNREMRLWDLKALSGLGTDSTVE
EVETGGCLGSYAHGLACSSAYFNPIGDKILSTSYDDLVRIWEIEPTKRDSWLSSPSPEID
LSPSIEARHDNQTGRWVSVMKARWCPNPRFPCHFTIGNMSQKLDIYNPKGELLTQLRHPA
LTTVPAVTNQHPSSSNVQVAGATAGGKVYLWT
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcggtactgaccgaatatgaacgacagcggctagaaaacatcaagaagaaccaatcc
ttactatcatcactagcgattaaatccgttggtccagcagccaagaagggtcagaagagg
ccatcctcgtcaactagcactcccaccaagaaacgtagtcgacaatctactggtactgat
tctttgattccggcaaagcgacatgttactcggtcgtctgttcgactcggaggggtcact
ctggaccgagtcgaacttcaatctcgatttgaaaaacaggaagaggatcttgaattagaa
cgcaagaaagaggatgaactcaaacacgctgatcgtcccttggtagttgagaactcgaag
gctggtccgagctcgtcacttacctctgaactgttcacttcacttgctacaagcatctta
tctaagcctatcaaaactatgaaacaagacgaggtcaatctcgattactctcctggaaaa
gatgcagattacgacagactaacaaatgagctcaatggattacaactaaaagcagttaat
aaagtctgtcctaatcgaatctattcaatgacttttcatcccgattcaagcaaatcatta
ctgtttatgggtgaaaaatttggaggggtagctatttgggacgccttaggaaatcatcgt
cattctggagtgaaatcggaggatgttgaggacgaagatcacaagtctgcctcgtcgaca
aacacggccgaaggagtgagcaaacgagacgtcaagccaatcaaaccagaagaacaagaa
gaagaagatgatgatgatcaaccggagtatgtagaagggacctcatacttcattcaagcc
catgcccgacactcagcggtatcagcgatccaagtccacccgactgacccacatttaatc
tacacatcatcgtatgatggaacgatacgagagctgaatttcgaaagccaaaagagcgta
gaaatagtggacgcagaggttcttaactccgatgaagaaaccctattctctgctttcgaa
ttcgctaataatggacatgagatttgggcctccgataactccggtggaatcgttcatcgt
gatcttcgtttacctaaacttaatgctcgtcgatggcaaatctcaaagaaaaagattgga
tgtcttagtttatgtccgaattctggagacagattggccgttactgccgggctaaatcga
gagatgcgcttatgggacttgaaggcattatcgggacttggtacggacagcacggtagaa
gaggtagaaacgggaggatgtctgggaagttacgcccatggccttgcctgttcatcggca
tatttcaaccctattggagacaagatcctgagtacgagctatgacgacctggtccggatc
tgggaaatcgagccgacgaagagagactcttggttatccagtccttcacccgagatcgat
ctctcacccagtatcgaagccagacacgataatcagaccggtcgatgggtctccgtcatg
aaagctagatggtgtcctaacccacgcttcccgtgtcattttacgatcggcaacatgtcc
caaaaactggatatatataatcccaagggagagttactcactcaactacgtcatcccgct
ttgactaccgttcccgctgttaccaatcaacatccttctagctctaatgtccaggtagct
ggcgctaccgctggtggtaaagtctatctctggacttga
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