Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_028896
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Entry
Pst134EA_028896 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Pst134EA_028896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_028896
03041 Spliceosome [BR:
pstr03041
]
Pst134EA_028896
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
Pst134EA_028896
Spliceosome [BR:
pstr03041
]
Complex B
Other components
Prp19-related factors
Pst134EA_028896
Complex C
Pst134EA_028896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
NRDE-2
CENP-B_dimeris
Na_trans_assoc
Motif
Other DBs
NCBI-GeneID:
72035268
NCBI-ProteinID:
XP_047798000
LinkDB
All DBs
Position
17:complement(462921..466997)
Genome browser
AA seq
1071 aa
AA seq
DB search
MEEYRSLFPITSNLNKLLKSDIALSNEPEHLLIEQDLLTNPENQSLWISYIERLTEELQR
DITDQRGKSNETQIRLLGAKLDSAQGRRAYQILVSVYERALIYFPKSFKLWRDYLQLRQS
FILGQPAKKFNLAPNKKKNPQLKSAGGGDQALTVLDYISKPDSQLDDNERDMDGGGAWTG
HLDSGLGYCEWKALASAHERSLIWLPQMPRLWLSYLTFLTHPSCPAPLSLSHTRHTFDRA
LRTLPHTLHERIWKPYLRWSEQIAGGETCIRVWRRYLAIDPSLTAHYVQFLVAEAESKTV
DQDEADEDEEEEEEEDEDEEQERVGQPKYPSKALVAAKLLLGLVRKARKGKYKSPDGKSP
YQLLLDFMELCEKFPTQVGISLKETLRRRERVKLAVTKDTETTLVESKDSDNKELATPGP
FNGLIRMAGAPVPVNATLPRSGREKPEENTEAYDPDVDPANPSKLDIDLIVESEGLSVYK
DQLGLLFTNLATYWIKRVEFDHARFTFENGISRVMTIRDFTTIFDGYAEFSEQYISTLME
SLKDDDGGDEEEENELDTKMKEFEELMDRRPFLVNEVLLRRNPNDVQEWEKRIILFGNED
SDNQIVNTYLKAIQTINPKKSTPNFNQLFIHFAKWYEENGADLSNPDLPDLVNARKVFEN
AVNINFLKVDDLAEIWIEWAEMEVRNENYSEALRVIRRATIIPINYKKKSISFHDESLAV
QVRLFKSLKLWSFRVDLEESIGTVESTQKAYDSIFELKIANAQIVVNYANFLEENEFWEE
SFKVYERGIELFSYPIVFEIWNTYLIKFIKRYQGNKIERTRDLFEQALENCPEKFVKSIF
LIYSQFEQDFGLAKRAMGVLERATEKVGLEDRFEMFGYYIAKATENFGLPATRSIYEKAI
KSLPNTQTAEMCLRFASLEQKLGEIDRARAIYAHSSQFCDPRTSPKFWETYHNFEIQHGS
EDTFREMLRIKRAVQASYNTETSYLAAKAAAARAAGTTNNNNKISSTHQDQVGSLDDEGD
PMSQLEKNEPSVNNSFVLSKERQEQLDQKVKNDVTSSTANVDEIAIDDDED
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatatcgatcactattcccgattacgagcaacctcaacaaactattgaaatca
gatatagcactctcaaacgagccagaacatctactaatcgaacaggatctactgaccaac
ccagagaaccagtcactatggatatcctacatcgaaagactaaccgaagaactccaacgg
gacatcaccgatcaaagagggaaatcaaacgagactcaaatcagattattgggcgccaaa
ttagactctgctcagggaagaagagcgtaccaaatcttggtctcagtctatgaacgcgct
ctgatctatttccctaaatcattcaaactgtggagagattatttacaactcagacaatct
tttatactcggtcaacccgccaagaaattcaatctagctcccaacaagaaaaaaaatcct
caattaaagtcagctggtggtggtgatcaagctttaaccgtcttagattatatatctaaa
ccggatagtcaattggatgataacgaacgggatatggatgggggtggggcgtggactggt
catctggattctggcttaggttattgtgaatggaaagcattggccagtgcacatgagagg
tcgttaatctggttgccccagatgccaaggttatggttatcatacttaaccttcctcact
catccatcatgtccagcaccactctcgttaagtcataccagacacaccttcgatcgagca
ttacgcactctcccccacaccttacacgagcgtatctggaaaccatatctgagatggtcc
gaacagatcgctggaggcgaaacttgtatccgagtgtggagacgttacctggctatcgat
cctagtctgaccgctcattacgtccaattcttggtcgctgaagccgaatcgaaaactgtc
gatcaagatgaggcagatgaagatgaggaggaagaagaggaagaggacgaggacgaggag
caggagagagtgggacaacctaaatacccatccaaggcactcgtggcggctaaattacta
ctgggattggtcaggaaagctcgaaaaggaaaatataaatcaccggatggaaagagtcca
tatcaactcttactagactttatggagctttgtgaaaagtttccaacgcaagtagggatc
agtttaaaggagactctcagacgcagagagagagtgaaactagctgtcaccaaagatact
gaaacaaccctagtcgagtcgaaggatagtgataataaggaactggctactcctggtccg
tttaacggattgatccgaatggcgggggccccagtcccggtgaatgctactctaccacga
tcgggacgagagaagccggaggagaatacggaagcttacgatccagatgtcgatcccgct
aatccatctaagttggatatcgatctgatcgtcgaatcagagggtctatcggtttacaaa
gatcagcttggattactgtttactaatctagctacgtattggatcaaacgagtcgaattc
gatcatgctagattcaccttcgaaaacgggatctcgcgggtgatgaccatacgagacttc
actacgatctttgatggctatgcagaattctcggaacaatatatctctactcttatggaa
tctttgaaagatgatgatggaggagatgaagaagaagaaaatgaattagatacaaagatg
aaagaatttgaagaattaatggatcgtagaccgttcttagtgaacgaagttttattaaga
aggaatccaaatgatgtccaagaatgggaaaaacgtataattttatttgggaatgaagat
tcagataatcaaatcgtcaacacatatttaaaagcgattcagactattaatcctaagaaa
tctacccctaacttcaatcaactctttatccatttcgctaaatggtacgaagaaaatggc
gctgatctcagtaatccggacttacctgatctcgttaatgctagaaaggtctttgaaaat
gcggtcaatattaattttcttaaagtcgatgatttggctgaaatttggatcgaatgggcc
gagatggaagtccgtaatgagaattattcggaagctttgagagttataagaagagcgacg
atcattccgattaattataagaaaaaatcgatcagttttcatgatgaatctttagccgtt
caagtccgattattcaagtctttaaaactttggtcattccgagtcgatttggaagagtca
attggtacggtagaatctactcaaaaagcgtacgattcaatctttgaactcaagattgct
aatgctcagattgtcgtaaattatgcaaattttctagaagagaatgagttctgggaagaa
tcatttaaagtatatgaacgaggaatcgagttattttcgtacccaatagtcttcgagatc
tggaatacatatctaatcaaattcattaagagatatcaggggaacaagatcgaaagaact
agagatttattcgaacaagctctcgagaattgtcccgagaaattcgtgaaatctatcttt
ttaatttattctcaattcgaacaagattttggattggctaaacgagctatgggcgtcttg
gaaagagctactgagaaagttggattagaagatagattcgaaatgtttggttattatatc
gctaaagctactgaaaatttcggtctacctgctacaagatctatctacgaaaaagctatc
aaatctctgcccaatactcaaactgctgaaatgtgtttaaggtttgcaagtctcgaacaa
aagttaggagagattgatagggctcgtgctatttatgctcattcttcgcagttttgcgat
cctagaacttccccgaagttttgggaaacgtaccataattttgaaatccaacatggaagt
gaagatacgtttagagagatgttaagaattaaacgcgccgttcaagcttcatataatact
gaaacttcttatcttgctgctaaagccgctgcagctagagcagcaggtactacgaataat
aataataagatcagtagcactcatcaagatcaagtcggttctcttgatgatgagggtgat
ccgatgagtcaactcgagaagaatgagccttctgttaataactcattcgtcctgtctaag
gagagacaagaacagctcgatcagaaagttaagaatgatgttactagttcgactgctaat
gtagatgagatcgccatcgatgatgatgaagattaa
DBGET
integrated database retrieval system
