Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_029344
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Entry
Pst134EA_029344 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K12590
exosome complex component RRP46
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pst134EA_029344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_029344
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Pst134EA_029344
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
STALD
Motif
Other DBs
NCBI-GeneID:
72035714
NCBI-ProteinID:
XP_047798401
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All DBs
Position
17:complement(3049372..3050554)
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AA seq
255 aa
AA seq
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MSIIRSDSRTEVDVRSLTMRMSILSRSDGSGQFSFGDLKALGAVTGPAEVRIRDEKPTEA
SIEVNVVPVCGLPGPQTKSLAHSIKQFFAPLILVKKYPRSLIQINLQTLSKPSDRWTNGF
STSSLEDVPVRLFDETQSVTEKAALINAASLALLDAGVGMRGCGFAVGVAIIPASVTKSN
NNLDNDNSDHIVLDPNPTEESSAKSLHLIGLHFGHQFNTPSSDGLNVGHVTLCESNGNFS
FDQVRQDPFSRFLLR
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcattcgctcagattcacggacggaagtcgatgtacggtcgttgacgatgagg
atgtcaatcttatcgcgctcggatggatctggacaattctcattcggcgatctcaaggca
ttgggcgctgttaccggtcccgctgaagttaggattagggacgagaaacctactgaggct
tctatcgaagttaacgttgtcccggtttgtggtcttccgggtcctcaaaccaagtctcta
gcacattcgatcaagcagttctttgcgccgttgatcttagtgaaaaaatacccaagatcg
ttaattcaaatcaatctccaaacactctcgaagccatctgatcgatggacgaacggattt
tcgacaagttctttagaggatgtaccagtgaggctatttgacgagacacagagcgtgacc
gagaaagcagcattgatcaacgcggctagtctagctctactagacgccggagttggaatg
agaggatgtggatttgccgtcggggtggctatcatcccagcctccgtgactaaatccaac
aacaaccttgataacgacaactccgatcatatagttctagatcctaatcctactgaagaa
tcttccgctaagagcttgcatctcatcgggctccatttcggtcatcagttcaacactcct
tcatccgatggtctcaatgtcggtcatgtcactctatgtgaaagtaatggtaactttagc
tttgatcaagtgcgtcaggatcctttttctagatttctccttcgctaa
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