Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_030458
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Entry
Pst134EA_030458 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03013
Nucleocytoplasmic transport
pstr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Pst134EA_030458
03015 mRNA surveillance pathway
Pst134EA_030458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_030458
Enzymes [BR:
pstr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Pst134EA_030458
5.6.2.5 RNA 5'-3' helicase
Pst134EA_030458
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Pst134EA_030458
mRNA cycle factors
Common to processing body (P body) and stress granule
Pst134EA_030458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
UvrD-helicase
ResIII
SLFN-g3_helicase
Viral_helicase1
DEAD
NPHP3_N
Helicase_RecD
AAA_22
Ribosomal_S27e
AAA_16
PhoH
SRP54
nSTAND3
Ribosomal_S13_N
AAA_5
Motif
Other DBs
NCBI-GeneID:
72036168
NCBI-ProteinID:
XP_047797635
LinkDB
All DBs
Position
18:complement(1562528..1566503)
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AA seq
1134 aa
AA seq
DB search
MENFSHLQGASEYSYSPANDDDDSLSLLSADTRGPGNPANRHHVEGGDSLSTIDDINFDE
LSLLDVNPEPNNRNRHQANNSANYDHHQARSDSTVDQPSQFNQNETEADFEDVLDDLNRE
LPGHACAYCGIHSPSSVVKCLICSKWFCNSRGGPGAHSTGSHIVNHLVRAKHKEVTLHED
GPLGETTPECYNCGSKNVFTLGFIPAKSDTVVVLLCRQPCASTPSSKSDLVWDTSQWSPL
IEDRQFLSWLVKVPDEQEVVRSKPVGFREITRLEEMWKENATATLDDLERDGALGEGEPQ
PILLRYEDAYQYQNIFGPLVKIESDYDRKLKESLTQNDVTVRWDMGLNQKRIAYFYLPKL
ESGEVRLAVGDELRLRYSGELQQAWEGPGHVIKVPNNQSDEVALELRRNEGVPHELTVNF
SVDFVWKSTSFDRMQMAMKTFAVDDQSVSGYIYRKLLGAEATVPQVLRTQMPKRVSAPNL
PELNHSQVSAVKSVLQKPLSLVQGPPGTGKTVTSASVVYHLSKMNPGQVLVCAPSNVAVD
QLTEKIHMTGLKVVRVQAKSREAIDSSVQYLTLHQQVANNDTHPDLQKLIQLKAEQGELS
STDERRFKSLTRLCEREILTTADVILCTCVGAGDPRLAKMKFRTVLIDEATQATEPECMI
PLTLGVKQVVMVGDHQQLGPTIMNKKAARAGLTQSMFERLVLLGNRPIRLQVQYRMHPCL
SEFPSNMFYEGSLQNGVTAPERIKKNVDFPWPQPATPMCFHSNLGQEEISSSGTSFLNRT
EASNVEKVVTRFFKAGVLPSQIGIVTPYEGQRSYIVTYMQTNGSLKKELYKDIEVASVDA
FQGREKDYIILSCVRSNDHQGIGFLNDPRRLNVALTRAKYGVVVLGNPKVLSKHALWHFL
LTAYKEKSCLVEGPLNNLQPSLVQLSKPRKPLDRADLPINRFEPNPRELPNLNYSRNGRA
STPTRFDQSFYKTVDSFSIPSDAQSVRSQATYASGLPPFSLPISRGMGYPNGTKRVGGGL
GSAGIGSSSYASSMISQDLMSQDSRSMRGGGGGGDDTSSVADSFADNTSLAAYSQADRLL
TGRSRNDRTGLDFRGPGATGPAPVGLGGGNKNFRVDDDDARSLISMQSSSIIDF
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggagaacttctcacatctacaaggtgccagtgaatacagctatagtccagccaacgac
gacgacgatagcctatcccttctttctgctgatactcgagggccaggaaacccagcgaat
cgacaccatgtcgaggggggtgacagtctatcgacgatcgatgatatcaacttcgatgaa
cttagcctgttggatgtaaatccggaaccgaataatcggaaccgccatcaagcaaataac
tcggccaattatgatcatcaccaagcacgctcagattcgaccgtcgatcaaccctctcaa
tttaaccaaaacgagactgaggcagattttgaagatgtcttagacgacctcaatcgagag
cttccgggacatgcatgtgcttactgtggcattcattcaccctcatcagtcgtcaaatgt
ctgatatgctcaaagtggttctgtaactcacgtggcggaccaggagctcattcaactggc
tctcacatcgtcaatcatctcgtcagggccaaacacaaggaagtcacacttcatgaggat
ggtccactaggggaaaccacaccggaatgttataattgcggatctaagaacgtcttcacc
ctaggttttatacctgccaaatcagatacggtggtcgtcctactctgtcggcaaccgtgt
gcctcaacaccgtcgtcaaagagtgacttggtttgggatacctcacaatggtccccgtta
attgaagatcgccagttcttgtcctggcttgtcaaggtccccgacgagcaagaggtcgtc
cgctccaaacccgtaggattccgtgaaatcactcgactcgaagagatgtggaaggaaaac
gcgacggccactttggatgacttggaacgtgatggcgccctcggagagggtgaacctcag
cctattcttttgcgatacgaagacgcctaccaataccaaaatatcttcggtccactcgtt
aagatcgaaagcgattacgatcgcaagttgaaggaaagtcttacccaaaatgatgtgacc
gttcgatgggatatgggtctcaatcagaaaagaattgcatacttttatctgcccaaactc
gaaagtggagaagtgagattggccgttggcgatgagctacggttgcgatattctggggag
cttcaacaagcctgggagggccctggtcatgtaatcaaagtgcccaacaatcaatcagat
gaagtagcgctcgagttacgccgaaacgagggtgtaccacatgaattgacggttaacttt
tcagtggattttgtctggaaatcaacttcatttgatagaatgcagatggctatgaagact
tttgcagttgatgatcagagtgtcagtggatacatctatcgcaagctgttgggagctgag
gctaccgtgccacaagtcctcagaactcagatgcccaaacgggtttccgctcccaacctt
cctgagcttaatcattctcaagtgagtgctgtgaagagtgttctgcaaaaacctttgagt
ttggtccaagggccacctggaacgggcaagacggtcacttcggcttcggtggtatatcat
ttaagcaagatgaatccaggacaggtgctcgtctgtgcaccctccaacgttgctgttgat
caattaactgaaaagattcacatgactggtctcaaagtggtcagagttcaagccaaatca
cgagaagcgattgatagctcggttcaatatcttacacttcatcaacaagtcgccaataat
gatactcatcctgaccttcagaaactcatacaactcaaagccgaacaaggggaattgagt
tccactgatgagagaagattcaaatctctcactcgattgtgcgaacgtgagatcttgact
accgccgatgtcatcctctgtacttgtgtaggtgctggtgatcctagattggccaaaatg
aaattcaggacggttttgatagatgaagcaactcaagcgaccgaaccagaatgtatgatc
ccattgaccctcggcgtcaaacaagtagtcatggtcggagatcatcaacaactagggccg
acaatcatgaacaaaaaagccgcgagagctggcttgacacagtcgatgtttgaacgctta
gtactattgggtaatcgaccgatcagattacaagtccaatatcgaatgcacccctgtctc
tcggagtttccttcgaatatgttctatgaaggttccttacagaatggagttactgctccg
gaaaggatcaagaagaacgtcgactttccttggccacaaccggctacacccatgtgtttc
cattctaacttgggacaggaggagatctcgtcatctggtacatcattcttgaatcgaacc
gaggcatcaaatgtcgagaaggtggtcactcgattcttcaaagctggggttcttccaagt
cagatcgggattgtcactccatacgagggtcaacgctcatacatcgtcacttacatgcaa
actaatggaagtctaaaaaaggaactctataaagacatcgaggttgctagtgtcgacgcc
tttcaaggtcgcgaaaaagactatatcatcctcagttgcgtgcgtagtaacgatcatcaa
gggatcggttttttgaatgatcctagacgactcaacgttgctctcacgagagccaagtat
ggtgtggttgtcttgggcaatcccaaagtcttgagcaagcacgcactttggcattttctc
ctcacagcttataaggagaaatcttgcttagtcgaaggcccattgaataaccttcaacca
agtttagttcagctttccaaacctagaaaaccactcgatcgggcggatcttccgatcaat
cgattcgaacctaacccccgcgaactcccaaatttgaattatagtaggaatggtcgtgct
agtacaccaactcgatttgatcaatcgttttataagacagttgactcattttcgattcca
tctgatgcacaatcggttcgatcacaagccacatatgcctcaggactaccaccatttagt
ctcccgatttcgcgaggtatgggatacccaaatgggactaaacgagtcggcggtggtttg
gggagtgcagggatagggagtagtagttatgcatcatcaatgatctcacaagatttaatg
tcacaggattctaggagtatgaggggtggaggaggaggaggcgatgatacgagttcagtt
gcagatagttttgccgacaataccagtcttgctgcttattcgcaagccgatcgtttattg
actggtcgcagtcgaaacgacagaactggcttagattttcgcggtcccggtgcaacaggt
cctgccccggtcggtcttggtggggggaataagaattttcgagtggacgatgatgatgct
cgtagtttgatctccatgcagagtagctcgatcatcgatttttga
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