Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_030558
Help
Entry
Pst134EA_030558 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Pst134EA_030558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pstr03041
]
Pst134EA_030558
Enzymes [BR:
pstr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Pst134EA_030558
Spliceosome [BR:
pstr03041
]
Complex A
U2 snRNP components
U2 related factors
Pst134EA_030558
Complex B
Pst134EA_030558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Motif
Other DBs
NCBI-GeneID:
72036268
NCBI-ProteinID:
XP_047797737
LinkDB
All DBs
Position
18:2063330..2069284
Genome browser
AA seq
1328 aa
AA seq
DB search
MAPARSRSPSPSRSSAQDDLKRRKTHSLKTEHPYRNESPRHHHQDKIRSNDHHSTAHRER
DRDRDHDRRRDRRDRTASPDRHSSKLKDREKDKDRYRSDRRQHHHHEDRSYRERRRSRSR
SRERERWSRRRSKSPNGPDERSDRDRRRDNPPPREPSERTSTSIDRHKSPKPTNTTHIPS
SSTPAVPKNSSPPAVPLNTIAPENDHTKPTLDSSTPGSAVAKARANAEAREGRLPGETLE
QQKLRMKRERLEQWKAKKALEENNNNNSSSNTSTPLPQTTITTKSEHNIQVTTSKTDHKK
IDSSIKIASKKTPLAADEATAAALAAAAISARLGTNSTPIPAPSKLMKNATPIGIKGLPT
KPSFNPFPDPSSNTTKLSSALGTEDDNSHTKIQKLTFEAINADDDLLKLVDAEEDSDEED
LVDGGHVGYNKRKIIDGVEEETGVIVAGSDEVDQQEGENESKIRLSQAVEKNTKKRFEAV
SNIESSISQSNNTTTISQVKMEIDDQKEVEEEEEIDPLDAYMSGVTDQVTKVNDSDKKKL
NQLNAGNKKLTDLDEDHPNDEDDQPAPSEDEIDKTNLRPEDIMALAAKKLKKKDLAPVDH
QKITYEPFRSAFYHPPAEVEEMTEEEAENIRIAMDGIKIRGQDCPKPVMKWSWFGLHAAC
LEVIKTLGYQSPSPIQGQAVPAIMSGRDVIGVAKTGSGKTLAFLLPMFRHIKDQRPLDPL
EGPIAMIMTPTRELATQIYKEGRPFLKSLGLRAACAYGGSPLKDNIADMKRGAEVIVCTP
GRMIELLTTNSGRVINMRRVTYLVLDEADRMFDMGFEPQVMKIVNQIRPDRQTVLFSATF
PKQMEALARKILRRPLEITVGGRSVVASEIEQIVEVREDSTKFNRLLEILGRSYNEDSES
RSLVFVDRQESADNLFRDLLKKGYPCLSLHGGKEQVDRDQVIADFKSGVTPIVIATSVAA
RGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCITFIAPDQERYAVDLIRALVT
SGAQYPKELKTMSDSFLEKIKSGKAQASGSGFGGKGLDRLEKDRDAKSRAERSAYGEPGG
EEASKEEVGTGVISTATGGTTSTTIPTVEIPEINVEVKRGPAPDSNRRPQPAAKPAPPAP
VDVAATPALTAALKAAQAAAQAKGLDASGISRAQNVVADLNAKLRSMIAAKNAQAQAGNH
ESTNNNLNNNNNRSKDPDATDFHAIVPINDYPQKARWKVTNKETMVQLVDSTGASVTNKG
VFYEKGKEPGPDEPPKLHLLVESNEEWRVQRAITEIKHILIEATTQALEAESRNPGHHQA
VGRYNVLG
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atggcccctgctcgctcaagatcaccatccccctccaggagttcagcacaggatgatctg
aagagaaggaagacacattcactcaagactgagcacccatacagaaacgaatctcctcgc
catcatcatcaagacaagattcgatctaatgaccatcactctaccgcccatagggaacgg
gacagagatagagatcatgatcgaaggcgggaccgtcgtgatcgaacggctagcccagat
cgtcacagcagcaagctcaaagacagagagaaggataaagatcgttatcgttccgatcgt
cgtcagcatcatcatcatgaagatcgatcttatcgtgagagaaggaggagtagaagtaga
agtagggaacgggaaagatggagtagaaggcgtagcaagtctccgaatggtccagatgaa
cgctcggatcgtgaccgtaggcgagataacccacctcctcgcgaaccaagcgagcgaact
tcaacctcaatcgaccgacataaatcgcctaaacctaccaatacaactcatatcccatct
tcatccacaccggcggtacccaaaaactcatcccccccagctgtacccctcaacacgatc
gctcccgaaaatgaccataccaaaccaactcttgattcttcaacaccgggttcagcagtt
gctaaggctagggcaaatgctgaggctcgtgaaggtcgtcttcccggcgagacattggaa
caacaaaaacttcgaatgaaacgcgaaagactcgaacaatggaaagctaagaaagcactg
gaggagaacaacaacaacaactctagttctaatacttcaactcctcttcctcaaaccact
atcaccaccaaatctgaacacaacattcaagttactactagcaaaaccgaccacaagaag
atagattcatcaattaagattgcttcgaagaagacaccgttggctgcagatgaagctaca
gcagctgcacttgcggcagccgcaatctcagctagattaggaactaactcaactccgata
ccagcacctagtaaattaatgaaaaacgcaacaccaattggaattaagggattacctacc
aaaccaagcttcaatccattcccagatcccagttcaaataccaccaaactgagttctgct
ctaggcactgaggatgataacagtcatactaagatccaaaaattaacctttgaagctatc
aatgctgacgatgaccttttgaaattagttgatgctgaagaagatagtgatgaagaagat
ttagttgatggtggtcatgttggttacaataaacgcaaaattattgatggtgttgaagaa
gaaactggagtgatcgttgctggttctgatgaagtagatcaacaggaaggtgaaaatgaa
tctaaaatcagactctctcaagctgtagaaaaaaacaccaagaaacgattcgaagcggtt
tcaaatatagaatcttcgatttcacaatcgaataatactactacaatcagtcaagtcaag
atggagatagatgatcaaaaagaagtagaagaagaagaagaaatcgatcctttagatgct
tatatgtctggtgtaactgatcaagtcactaaagtcaatgatagcgataagaaaaaattg
aatcaattgaatgctggtaataagaaactcaccgatctcgatgaggatcatcctaatgat
gaggatgatcaacctgctcctagtgaagatgaaatcgataaaactaatctcagaccggag
gacatcatggcactagcggccaagaaactgaaaaagaaagatttggcgccagttgatcat
caaaagataacctacgaaccgttccggagtgctttctatcatccacctgcagaagtagaa
gaaatgacagaagaagaagccgaaaacattagaatcgctatggatggaattaagattcgt
ggtcaggattgtcctaaacccgtcatgaagtggagttggtttggtttacatgcagcatgc
ttagaagttatcaaaactcttggatatcaatcaccatcaccaattcaaggacaagccgta
ccagcgatcatgtcgggtcgagatgtgattggtgtagccaagacgggatctggaaagacg
ttggcattcttattacccatgtttcgacacattaaagatcaaagacctctcgatcctctc
gaaggacctatagctatgatcatgactcctaccagagaattggctactcagatctataaa
gagggtagaccgttccttaaatctttgggcttaagggcagcttgtgcttatggtggatca
ccattaaaagacaatatcgcagatatgaaaagaggtgcagaagtgatcgtttgtactcct
ggaagaatgatcgaacttttgactacaaattctggtcgagttattaatatgcgtcgtgtt
acttatcttgtcttggatgaagctgatcgtatgtttgatatgggttttgaaccgcaggtg
atgaaaattgttaatcagattcgaccagatcgtcaaactgtactcttctcagctacattt
ccaaaacaaatggaagccttagcccgaaagattcttagacgaccattagaaatcacagtt
ggaggtagatcagtagtagcatcagagatagaacagatagtcgaagtgcgagaagattcg
accaagtttaataggttattagagatcttgggtaggtcttataatgaggactcagaatca
cgttcattagtttttgtagatcgacaagaatcagccgacaatttatttcgagatttatta
aagaaaggatatccatgtttatctttacatggaggtaaagaacaagtagatagagaccaa
gtgattgcagattttaaatctggtgtaactccgatcgtgattgcaacatctgttgcggct
agaggtttagatgtcaaacaactcaagttggtcattaactacgatgctccaaatcatatg
gaagattacgttcatcgggctggtcggaccgggagagctggtaataaaggtacttgtatc
accttcatcgctcctgatcaagagagatatgccgttgatttaatcagggcattggtcact
agtggtgctcaatatcccaaggaactcaagacaatgtcagattcgtttttggaaaagatc
aaatctggaaaagctcaagcctcagggtcaggatttggtggtaaaggtttagatagatta
gagaaagatcgagacgctaaatcacgtgcagaaagatcagcatatggagaaccaggagga
gaagaggcgagtaaagaagaagttggaactggtgtgattagtaccgcgacgggtggtact
acctctactacgattcctactgttgagatacccgaaattaatgtggaagttaagagaggt
cctgcgcctgattcaaatagacgtcctcaacctgccgccaaacctgctcctcctgccccc
gttgatgttgctgcaactcccgccttgacagctgcactcaaagctgctcaagcagcagca
caagccaaaggtctcgatgcaagtggaatctcaagagcacaaaacgtggtagctgactta
aacgctaaattaagatcaatgattgctgcaaagaatgctcaagctcaagccggaaatcat
gaatcaactaataataacttgaacaataataataatcgatctaaggatcctgatgctact
gattttcatgctattgttcctattaatgattatcctcaaaaagctagatggaaagtcaca
aataaagaaactatggttcaattggtcgatagtactggagcatcggtcactaataaaggt
gtattttatgagaaaggtaaagaacctggaccagatgagccacctaaattacatctctta
gttgaatcaaacgaagagtggagagtacaacgagcgatcactgaaatcaaacacatcttg
atcgaagctactactcaagctctagaagctgaatctagaaaccctggacaccatcaagcc
gttggtagatataatgtattaggctaa
DBGET
integrated database retrieval system
