Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_032335
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Entry
Pst134EA_032335 CDS
T09520
Name
(RefSeq) uncharacterized protein
KO
K12590
exosome complex component RRP46
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pst134EA_032335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_032335
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Pst134EA_032335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
STALD
Motif
Other DBs
NCBI-GeneID:
72037535
NCBI-ProteinID:
XP_047796939
LinkDB
All DBs
Position
Unknown
AA seq
307 aa
AA seq
DB search
MSIIRSDSRTEVDVRSLTMRMSILSRSDGSGQFSFGDLKALGAVTGPAEVRIRDEKPTEA
SIEVNVVPVCGLPGPQTKSLAHSIKQFFAPLILVKKYPRSLIQINLQTLSKPSDRWTNGF
STSSLEDVPVRLFDETQSVTEKAALINAASLALLDAGVGMRGCGFAVGVAIIPASVTKSN
NNLDNDNSDHIVLDPNPTEESSAKSLHLIGLHFGHQFNTPSSDGLNVGHVTLCESNGNFS
FDQLQTVLKYGSLATQQILEFVRRSCETVYQQHEPDQEENSNPSDPNSSAVNATNENRKK
KKVKKTK
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcattcgctcagattcacggacggaagtcgatgtacggtcgttgacgatgagg
atgtcaatcttatcgcgctcggatggatctggacaattctcattcggcgatctcaaggca
ttgggcgctgttaccggtcccgctgaagttaggattagggacgagaaacctactgaggct
tctatcgaagttaacgttgtgccggtttgtggtcttccgggtcctcaaaccaagtctcta
gcacattcgatcaagcagttctttgcgccgttgatcttagtgaaaaaatacccaagatcg
ttaattcaaatcaatctccaaacactctcgaagccatctgatcgatggacgaacggattt
tcgacaagttctttagaggatgtaccagtgaggctatttgacgagacacagagcgtgacc
gagaaagcagcattgatcaacgcggctagtctagctctactagacgccggagttggaatg
agaggatgtggatttgccgtcggggtggctatcatcccagcctccgtgactaaatccaac
aacaaccttgataacgacaactccgatcatatagttctagatcctaatcctactgaagaa
tcttccgctaagagcttgcatctcatcgggctccatttcggtcatcagttcaacactcct
tcatccgatggtctcaatgtcggtcatgtcactctatgtgaaagtaatggtaactttagc
tttgatcaactacaaacagttttgaaatacggctctttagctactcaacagatccttgaa
tttgtgcgacgaagttgtgagactgtttatcaacaacatgaacctgatcaagaggagaac
agcaatccttccgatcctaattcttctgccgtcaatgctactaacgaaaataggaaaaag
aaaaaggttaagaaaaccaaatga
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