Plautia stali symbiont: E05_16410
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Entry
E05_16410 CDS
T03051
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
psts
Plautia stali symbiont
Brite
KEGG Orthology (KO) [BR:
psts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psts03016
]
E05_16410
Enzymes [BR:
psts01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
E05_16410
Transfer RNA biogenesis [BR:
psts03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
E05_16410
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
BAN96407
UniProt:
U3TYZ0
LinkDB
All DBs
Position
complement(1311035..1312984)
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AA seq
649 aa
AA seq
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MFQDNPLLAQLKEKLHAQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
SAVIHTDKDRESAEPETLIEPFLMRFVGRVQKKDDRLSIVPDHPLLKDAIQCRAVRGLTH
DFQNGDWAVAEMRRHPLKGDRGFYAELTEFVVTADDHLAPWWVTLSRHNLEREAPEVGFG
EMLDEQLQREDLTVLNFVTIDSASTEDMDDALYVEELAEGKLALTIAIADPTAYVAAGSE
LDQLAAKRAFTNYLPGFNIPMLPRELSDDVCSLRPNVKRPALVCRVTVLPDGSLADDAHF
FAAWIESKAKLVYDEVSDWLENSGSWQPENDTIAQQIRLLHRLCLARGEWRQTHALVFKD
RPDYRFVDYRFVLGEKGEVLDIIAEPRRIANRIVEEAMILANVCAAKVLQEKLGFGIYNL
HTGFDQANAEQAAGVLAGHGITVDPQAITTLEGFRQLRRQLDAQPTQYLDSRIRRFQSFA
EISTEPGPHFGLGLDAYATWTSPIRKFGDMINHRLLKAIVRGESIARPQDDVTLIMSERR
RLNRMAERDVGDWLYARFLAPFAGTDRKFSAEIIDVSRGGMRVRLLENGAVAFIPAPFIH
AVRDELVCSQESGTVQIKGEVAYRVTDVIDVTIAEVRMETRSVVARPAA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataacccgctgctcgcgcagctgaaagagaagcttcacgcgcagaccccg
cgcgccgaaggtgttgtgaaaggcacggaaaaaggctttggcttcctcgaagttgacgct
cagaaaagctacttcattccccctccgcagatgaagaaagtgatgcacggcgatcgcatt
tccgccgtgatccacactgataaagaccgcgagagcgcggagccggaaaccctgattgag
ccgttcctgatgcgctttgtcggccgcgtgcagaaaaaagatgaccgcctgtctatcgtg
ccggatcatccgctgctgaaagacgcgattcagtgccgtgccgtgcgaggcctgacccac
gatttccagaacggtgactgggccgtagcagagatgcgccgccatccgctgaaaggcgat
cgcgggttctatgctgaactgaccgaatttgttgtcaccgcggacgatcacctcgcgccg
tggtgggtcacgctgtcgcgccacaatttggagcgcgaagcgccggaagtgggctttggt
gagatgctggacgaacagctgcagcgtgaagatctcacggtgttgaactttgtcaccatc
gacagcgccagcaccgaagatatggacgatgcgctgtatgtcgaagagctggcagaaggt
aagctggcgctgaccatcgccattgccgacccgaccgcttacgttgctgccggcagcgaa
ctcgaccagctggccgccaaacgcgccttcaccaactatctgccgggctttaacatcccg
atgctgccgcgcgaactgtcagatgatgtctgctcgctgcgccctaacgtgaagcgtccg
gcgctggtgtgtcgcgtcactgtactgccggatggcagcctagctgacgatgcccacttc
tttgccgcgtggatcgaatccaaagccaagctggtgtacgacgaagtgtcggactggctg
gagaacagcggcagctggcagccggaaaatgacaccatcgcgcagcagattcgcctgctg
catcgcctgtgcctggcgcgcggcgagtggcgtcagacgcatgcactggtgtttaaagat
cgccctgactaccgcttcgtagactaccgcttcgtattgggtgagaaaggcgaagtgctg
gatatcattgcggaaccgcgccgcatcgctaaccgcatcgtggaagaagcgatgatcctc
gcgaacgtctgcgccgctaaagtgctgcaggagaagcttggcttcggtatctacaacctg
cacaccggtttcgaccaggcgaacgcggaacaggcggctggcgtgctggccggtcacggt
atcacggttgatccgcaggccattaccacgctggaaggtttccgtcagctgcgtcgtcag
cttgatgcgcagccgacccagtatctcgacagccgcattcgtcgtttccagagtttcgcc
gaaatcagcaccgaaccgggcccgcattttggcctcggcctcgacgcctacgcgacttgg
acttcaccgattcgtaaattcggcgacatgatcaaccatcgtctgctgaaggctattgtg
cgcggcgaaagcattgcgcggccacaggatgacgtgaccctgatcatgagtgagcgtcgc
cgtctcaaccgcatggccgagcgcgatgtcggtgactggctgtacgcgcgcttcctcgca
ccgtttgccggcactgaccgcaaattcagcgcggagatcatcgacgtttcgcgcggcggc
atgcgcgtgcgcctgctggagaacggtgcggtcgcctttatccctgccccgttcattcac
gccgtgcgtgacgaactggtgtgctcgcaggaaagcggcaccgtgcagatcaaaggtgaa
gtggcctaccgcgtgaccgatgtgattgatgtgaccatcgccgaagtgcgcatggaaaca
cgcagcgtggtggcccgtccggccgcctga
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