Plautia stali symbiont: E05_20440
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Entry
E05_20440 CDS
T03051
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psts
Plautia stali symbiont
Pathway
psts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E05_20440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psts03019
]
E05_20440
03400 DNA repair and recombination proteins [BR:
psts03400
]
E05_20440
Enzymes [BR:
psts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E05_20440
Messenger RNA biogenesis [BR:
psts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E05_20440
DNA repair and recombination proteins [BR:
psts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E05_20440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAN96810
UniProt:
U3TSL3
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All DBs
Position
complement(1635492..1637315)
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AA seq
607 aa
AA seq
DB search
MATSAVLNQEMLAQQVLQDTFGYQQFRPGQQTIIETALSGRDCLVVMPTGGGKSLCYQIP
ALVREGLTLVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQQVFADCRSGKLRLLY
IAPERLMMDNFLDTLQHWNPVMLAVDEAHCISQWGHDFRPEYGALGQLRQRILQLPVMAL
TATADEATRNDIVHLLQMHDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKSGI
IYCNSRAKVEDTAARLQSRGISVGAYHAGIDSEQRARVQEAFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRKCLEEKAPGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQQPCGNCDICLDPPRRYDGLVEAQKAL
SGIYRTGQRFGMSYIVEVLRGSTNQRIRDNGHDKLPVYGLGREQSQEHWVSVLRQLIHLG
MVMQNIAMHSALQLTEAARPVLRAEVPLMLAVPRTVTVKSRSSAPKVYGGNYGRKLFAKL
RKLRKAIADEENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGHRKLERFGKPFLLMI
KEHLDEE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacatcggcagtgcttaatcaggaaatgctggcgcagcaggtattacaggatacc
ttcggctatcagcagttccgtccgggtcagcaaaccatcattgaaaccgcgctgtcaggg
cgcgactgcctggtggtgatgccgaccggcggcggcaaatcgctgtgctatcaaatcccg
gcgctggtgcgcgaagggctgacgctggtggtttcgccgctgatttcactgatgaaagat
caggtcgatcagctgctggcaaacggcgtggcggcggcgtgcctcaactcgacccaaacg
cgtgagcagcagcagcaggtgtttgcggactgccgcagcggcaaactgcggctactgtac
atcgcgccggaacgtctgatgatggataacttcctcgacaccctgcagcactggaatccg
gtgatgctggccgtcgatgaagcgcactgtatttcgcagtggggccacgatttccgtccg
gaatatggcgcgctcggtcagctgcgccagcgcattctgcagctgccggtgatggcgctg
accgccaccgccgatgaagccacgcgtaacgacatcgtgcatctgctgcagatgcacgat
ccgctgattcagatcagcagttttgaccgtcccaacattcgctacacgctggtggagaag
ttcaagcctaccgagcagctgctgcgctacgtgcaggatcagcgcggcaaaagcggcatc
atctactgtaacagccgcgccaaagtggaagacaccgctgcgcgtctgcagagtcgcggc
atcagcgttggcgcttatcatgccggcatcgacagcgagcagcgcgcacgcgtgcaggaa
gcctttcagcgtgatgatttgcaaatcgtggtagcgactgtggcgttcggcatgggcatc
aacaagcccaacgtgcgttttgtggtgcacttcgacattccgcgcaatatcgaatcctat
tatcaggagaccggccgcgccgggcgtgatggcctgccggcggaagcgatgatgctgtac
gacccggccgacatggcgtggctgcgtaagtgtctggaagagaaagcgccagggccgctg
caggatattgaacgccacaaactcaacgccatgggcgcgtttgccgaggcgcaaacctgc
cgtcgtctggtgctgcttaactactttggtgaaggtcgccagcagccgtgcggcaactgc
gatatctgcctcgatccgccgcgtcgctatgatggcttggtcgaagcgcaaaaagcgctg
tcgggcatttatcgtaccgggcagcgctttgggatgagctatattgttgaagttttgcgc
ggttcaaccaaccagcgcatccgcgataacggccacgacaaattgccggtgtacggcctc
gggcgcgagcagagtcaggagcactgggtcagcgtgttgcgccagctgatccacctgggc
atggtgatgcaaaacatcgccatgcactcggcgctgcagctcaccgaggccgcgcgcccg
gtgctgcgcgctgaagtgccgctgatgctggcggtaccgcgtaccgtgacggtgaaaagc
cgcagcagcgcgccaaaagtctacggcggcaattacggtcgcaagctgttcgctaagctg
cgtaagctgcgtaaagccatcgccgacgaagagaatattccgccttacgtggtgtttaac
gacgctacgctgattgaaatggcagaacaaatgccggtcagcgcttcagagatgctgagc
gttaacggggtcggtcatcgcaaactggagcgcttcggtaagccgttcctgctgatgatc
aaagaacatcttgatgaagaataa
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