Plautia stali symbiont: E05_29430
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Entry
E05_29430 CDS
T03051
Name
(GenBank) diguanylate cyclase/phosphodiesterase
KO
K18765
RNase E specificity factor CsrD
Organism
psts
Plautia stali symbiont
Brite
KEGG Orthology (KO) [BR:
psts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psts03019
]
E05_29430
Messenger RNA biogenesis [BR:
psts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E05_29430
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
DUF4900
Motif
Other DBs
NCBI-ProteinID:
BAN97709
UniProt:
U3TYW2
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All DBs
Position
2379899..2381107
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AA seq
402 aa
AA seq
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MLEDQEDVGTHGVVMMVRLPDLDTLHETLGPTLVDEYLFDLVNMLSTFVLRYPGALLARY
FRSDFAVLLPHRTLKEANSIADQLINAVDSLPPMRMVDRDDLIHIGISAWRSGESVSQVM
ENVELATRRAALQGGNNWSVGEGNTLEMGRGSVRWRTLLENTVNRGGPRLYQKPKVLLDG
KVHHREMLAGVFDGDKEVVSAEFMPLVLQLGMADSWDRQLVMRIAALSEVWPDETLALPV
NIDSLLQRPFQRWLQKLLLQCSKSQRKRFLFELAEADVCQHINRLVPVFRMLTAFGCRIA
VDQAGLTVVSSAYIKQFPIELIKLYPGLIRNIERRTENQLFVQSLLEVCKSTPTKAFAAG
VRTRAEWQTLAGLGVAGGQGDFFAPSLPVNSNVKKHSQRYRI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
ttgctggaagatcaggaagacgttggcacgcacggtgtggtgatgatggtgcggctgccg
gacctcgacaccctgcatgaaaccctcgggccgacgctggtcgatgaatacctgttcgac
ctggtgaacatgctctccaccttcgtgctgcgctatccgggggcgctgctggcgcgctat
ttccgcagcgactttgccgtactgctgccgcaccgcactttgaaagaggccaacagcatt
gccgaccagctgatcaacgcggtggattcgctgccgccgatgcgcatggtggatcgcgat
gatctgatccacattggcatcagcgcctggcgcagcggcgagtcggtgtcgcaggtgatg
gagaacgtcgagctggccacgcgccgggcggcgctgcagggcggcaacaactggtcggtg
ggcgagggcaatacgctggagatggggcgcggcagcgtgcgctggcgcaccctgctggaa
aacaccgtgaaccgcggcggcccgcgtctgtaccagaaaccgaaggtgctgctggacggc
aaagtgcatcaccgtgaaatgctggcgggtgtgttcgacggcgataaagaggtggtgtcg
gcagagttcatgccgctggtgctgcagcttggcatggccgacagctgggatcgccagcta
gtcatgcgtattgcggcgctgtcggaggtctggccggatgaaacgctggcgctgccggtc
aatatcgattcgctgctgcaacggccgttccagcgctggctgcaaaaattgctgctgcag
tgcagtaaatcgcaaagaaaacgatttttatttgaacttgctgaggcggatgtttgtcaa
cacatcaatcgtttagtgccggttttccgtatgctgaccgcgtttggctgtcggattgcg
gtagatcaggccggattaacagtggtgagtagcgcttacatcaagcagttcccgattgag
ctgatcaagctctatccgggcctgattcgcaacattgagcgccgtacagaaaatcagctg
ttcgtgcaaagtttgctggaagtgtgtaaatccacgcccaccaaagcctttgccgccggt
gtacgcacgcgcgcggagtggcaaacgctggccgggctgggcgtcgcgggcggccagggc
gacttttttgccccttcgctgccggtgaacagtaacgtgaagaaacactcgcaacgttac
cggatttag
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