Plautia stali symbiont: E05_40460
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Entry
E05_40460 CDS
T03051
Symbol
rpoA
Name
(GenBank) RpoA protein
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psts
Plautia stali symbiont
Pathway
psts03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psts00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E05_40460 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psts03021
]
E05_40460 (rpoA)
03400 DNA repair and recombination proteins [BR:
psts03400
]
E05_40460 (rpoA)
Enzymes [BR:
psts01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E05_40460 (rpoA)
Transcription machinery [BR:
psts03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E05_40460 (rpoA)
DNA repair and recombination proteins [BR:
psts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E05_40460 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BAN98812
UniProt:
U3U5Z1
LinkDB
All DBs
Position
complement(3208659..3209648)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLALRVQGKDEVILTLNQSGIGPVTAGDITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
DRIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRASTILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagccgttagagcgtggctttggacatactcttggt
aacgcactgcgccgtattctgctttcttccatgccgggttgcgcggtgaccgaggttgag
attgatggcgtgctgcacgagtactccaccaaagagggcgtacaggaagatatcctggaa
atcctgctcaatctgaaagggctggcgttaagagttcagggtaaagatgaagtcatcctc
actctgaatcaatctggcattggccctgtgactgcaggcgacattacccacgacggtgat
gtcgaaatcgtcaagccgcagcatgtgatctgccatctgaccgatgaaaacgcgtctatt
agcatgcgtatcaaagttcagcgtggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccaatcggccgtctgttggttgacgcttgctacagccctgta
gaccgtatcgcctacaatgttgaagcagcgcgtgtagaacagcgcaccgacctggacaag
ctggtcatcgaaatggaaaccaacggcacaatcgatcctgaagaggcgattcgtcgtgcg
tcgaccatcctggcagaacaactggaagctttcgttgacttacgtgatgtacgtcagccg
gaagtcaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagctgcttaaaacgcctaacctaggtaaaaaatctctt
accgagattaaagacgtgctcgcatcacgtggtctgtctctgggcatgcgcctggaaaac
tggccaccggcaagcattgctgatgaataa
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