Stutzerimonas stutzeri 28a24: CH92_11875
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Entry
CH92_11875 CDS
T03390
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pstt
Stutzerimonas stutzeri 28a24
Brite
KEGG Orthology (KO) [BR:
pstt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pstt03032
]
CH92_11875
03400 DNA repair and recombination proteins [BR:
pstt03400
]
CH92_11875
Enzymes [BR:
pstt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CH92_11875
DNA replication proteins [BR:
pstt03032
]
Prokaryotic type
DNA Topoisomerases
CH92_11875
DNA repair and recombination proteins [BR:
pstt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CH92_11875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AHL75757
UniProt:
W8RBD2
LinkDB
All DBs
Position
2537197..2538300
Genome browser
AA seq
367 aa
AA seq
DB search
MLIDQGGGTAPPLAAGTRPIPTDERSDTGTALCPPLPADLHYVDDHSPGLSRRILRGKYA
YFLPTGERIRDAAEISRINKLAIPPAYTDVWICTDPQGHLQATGRDARGRKQYRYHPRWR
EVRDTTKYERLLAFGAALPKLRARLEEHLALRGLPREKVMALVVQLLESTLIRVGNSRYA
RENRSYGLTTLRTRHVDVHGAAIRFQFRGKSGVKHQVTLKNQRLARIMRRCMELPGQHLF
QYLDEEGLRRPVSSSDVNQFIQDMTGGDFTAKDYRTWAGSALALEYLRKREWQPNTVARR
NLVETVTQVSRQLGNTPAICRQCYIHPDVLQAFTSGELAQLPKARKRKWLSSEEATLLSF
LAERNPT
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgatcagggcggtggaactgctccgccattggcagcaggtactcgtccgata
ccgacggacgagcgatccgatacaggcacggctctgtgtcctccgcttccggccgatctt
cattacgttgacgatcacagccctggactcagtcggcgaatattgaggggcaaatatgcc
tacttcctgccgaccggggagcgcattcgcgacgcggcagagatctcccggatcaacaag
ttggccattcctccagcttataccgatgtctggatctgcaccgatccgcagggacatcta
caggctaccggacgcgatgcccgcggtcgcaagcaataccgctatcacccccgctggcgg
gaagtccgggacaccaccaaatatgaacgtcttctggcattcggtgcagcattacctaag
ttgcgagcccgcctggaggaacatctggccctgcgcggactgccgcgagagaaggtcatg
gcgctggtcgtgcaactgctcgaatcgacattgattcgtgttggcaactcgcgctatgca
cgggaaaaccgctcctatggcctgactacattgcgtacgcgtcatgtggatgtgcacggc
gccgcgatccgcttccagtttcgaggcaagagcggtgtaaagcatcaggtcacgctgaaa
aatcagcgcctggcgcggatcatgcgccgctgcatggagctgcccgggcagcatcttttt
cagtacctggacgaagaaggcttacgccgcccggtgagctcgagtgacgtgaatcagttt
atccaggacatgaccggaggtgacttcaccgccaaggactaccgcacctgggccggtagc
gccctagccttggaatacctgcgcaagcgtgagtggcaaccaaacacggtcgcccgtcgc
aacttggtcgagacggttacccaggtgtcccgccagcttggcaacaccccggccatttgc
cgccagtgctacatccaccccgacgtactacaggccttcacttcgggggaactcgcccaa
ttgcccaaggctagaaagcgcaaatggctgagcagcgaggaggccaccttgttgagcttt
ttggccgagcgcaatcccacctga
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