KEGG   Stutzerimonas stutzeri 28a24: CH92_15890
Entry
CH92_15890        CDS       T03390                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pstt  Stutzerimonas stutzeri 28a24
Brite
KEGG Orthology (KO) [BR:pstt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pstt03400]
    CH92_15890
Enzymes [BR:pstt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CH92_15890
    5.6.2.6  RNA 3'-5' helicase
     CH92_15890
DNA repair and recombination proteins [BR:pstt03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CH92_15890
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII Lhr_WH DprA_WH AAA_25 PhoH
Other DBs
NCBI-ProteinID: AHL76494
UniProt: W8R1P9
LinkDB
Position
complement(3426037..3430461)
AA seq 1474 aa
MKPTPVHDALAAFHPAVAGWFSRSFPAPTPAQTRAWPLIRSGQSTLVAAPTGSGKTLTAF
LAALDQLVQQGLAEGGLPDETAVLYVSPLKALSNDIHLNLEQPLAGISAELQHLGLPPLE
IRTAVRTGDTPQAERAAMRKRVPHILVTTPESLYVLLGSESGRQMLAGVRSVIVDEIHAI
AGNKRGSHLALSLERLEALCGRPLVRVGLSATQKPIEAVADYLVGVGRRCEVVDIGHGRA
RDLALEVPPVPLEAVMSNDVWELVYDRLAALAVEHRTTLVFVNTRRMTERAARHLSERLG
NAVVAAHHGSLAREQRLDAEQRLKRGELRVLVATASLELGIDIGDVELVCQLGSPRSISA
FLQRVGRAGHQVGGVSKGRLFPNSRDDLIECTALLDSVRRGELDTLVIPAAPLDVLAQQI
IAEVSCREWQEDALLALVRRAMPYATLSEENYQALLAMLAEGYTTRHGARGAYLHRDVVN
RSLRGRRGGRLTALTSGGTIADNADYSVLLEPQGFNIGTVNEDFAVESLAGDVFQLGNTA
YRIIRIEAGRVRVEDAQGQPPNIPFWLGEAPGRSDELSAAVARLRGEIDERLAEMDFCRS
ALARDSETAAVSTFASKLAPAKAAGEASQTTSRLQPAIDWLMDTLGLPDAAARQIVEYLA
RTRSALGALPTQQRLIMERFFDESGGTQLVIHSPYGSRINRAWGLALRKRFCRTFNFELQ
AAATEDAIIFSLSTSHSFPLEEVWRYLHSNSAEGVLIQALLDAPLFGVRWRWNATTALAL
PRMAGGRKVAPQLQRMKSEDLLATVFPDQVACLENIVGEREIPEHPLVAQTLDDCLHDAM
DSEGWLALLRRIEGGEIELSARDLPMPSPLAMEVLGARPYAFLDDAPLEERRTQAVLNRR
WSDPESSDDLGALDAAAIEAVREEAWPQARNPDELHEALMGLVCLAEAEVQADPQWSEWL
SELARGGRATRMQVAQERALWLPIERLALLQAIYPSACCEPTLTPLPGFDLPSSEDDALL
ELIRARLTGFGPLRIPLIARPLALPASAVALALTRLESEGYVLRGRFTPGTSEEEWCERH
LLARIHRYTVKRLRREIEPVERADFMRFLFDWQHLSDATRMQGRDALGPVVEQLEGFQAA
AGAWENDLLPARLKDYGGPWLDELCRSGRIVWTRLAGRIKASSGPVRGTPIVLLPRRHLS
AWYALASDAPQPELSSRAQRVFETLQAQGALFFDELQHEAHLLRSELEDALGELVAVGLV
NADSFAGLRALLAPAAKRSRSSRQSRGGAFIGGMADAGRWALVRKATATTADPAPARRPP
LDPEALEHIAMVLLRRYGVVFWRLLDREADWLPPWRDLLRVYHRLEARGEIRGGRFVAGL
PGEQFALPEAVGLLREIRKRPLSGEMIAVSAVDPLNQVGTLLPGERVPAVAGNRILYRDG
VPLGLLIAGKPELLVELDEDDQRKARQLLAVARR
NT seq 4425 nt   +upstreamnt  +downstreamnt
atgaaaccgacccccgttcacgatgcgctggctgcgttccaccctgcggtagccggttgg
ttcagccgcagcttcccagcgccgactccggcccagacgcgtgcgtggccgctgatccgt
tccggtcaatcgacgctggtggccgcgcctaccggctccggtaaaacgttgacggccttt
ctcgccgcgcttgatcagttggtccagcaaggtttggccgagggcggcctgcccgacgaa
acagcagtgctctacgtttcgccgctcaaagcgctgtctaacgatatccacttgaatctg
gaacagccgctggcagggatttccgctgagttgcaacacctcgggctgccgccgctggag
attcgtaccgcggtgcgcacgggcgatacgccgcaggccgagcgcgcggcgatgcgcaaa
cgggtaccgcacatcctggtaaccactccggaatcgctctatgtgctgttgggctccgaa
tccggtcggcagatgctggcgggcgtccgtagcgtcatcgtcgacgagattcatgcgatc
gctggaaacaagcgcggcagccatctggcgttgtcgctggaacgcctcgaagccctttgc
ggacgaccgctggtgcgcgtcggcttgtcggcaacgcagaagccgatcgaggcggtggcg
gattatctggttggcgttggccgccgctgcgaagtcgtcgacatcggacatgggcgtgcg
cgcgacctggcgctcgaagtgccgccggtaccgctggaagcggtgatgagcaatgacgta
tgggaattggtctacgatcgtctggcggccttggcggttgagcaccgaaccaccctggtg
ttcgtcaatacgcgtcggatgaccgagcgggctgctcggcatctcagcgagcgcctcggc
aacgcggtggttgcggcgcaccatggcagcctggcccgcgagcagcgattggacgccgaa
caacggctgaagcgtggcgaactgagagtgctggtggccactgcctcgctggagctgggc
atcgacatcggcgatgtggagctggtctgccaactcggctcgccgcgctccatttccgcc
tttcttcaacgcgtcggtcgtgctgggcatcaggtcggcggtgtctccaaagggcggctg
tttcccaattcgcgcgacgatctgatcgaatgcaccgccttgctcgacagtgtgcgtcgc
ggcgagctggatacgctggtgattcctgccgcgccgctggatgtactggcgcagcagatc
atcgccgaggtgtcgtgccgcgagtggcaggaggatgcgctactggcgctggttcgacgg
gccatgccgtacgcgacgctcagcgaagagaactatcaggcgctgctggcaatgctggcc
gagggttacaccactcgccacggagcgcgtggcgcctatctgcaccgcgacgtggtcaac
cgcagcctgcgaggtcgccgtggtggccgcctgaccgcgctgacttccggtgggaccatt
gccgacaatgccgactacagcgtgctgctcgaaccgcagggcttcaacattggcaccgtg
aacgaagacttcgccgtggaaagtctggccggtgacgtgtttcagttgggcaataccgct
tatcgcatcatcaggatcgaggcggggcgggtgcgggtcgaggatgcgcaggggcagccg
ccgaacatcccgttctggctgggcgaagcgcccgggcgcagcgatgagctttcggcagcg
gttgcgaggctgcgcggggagatcgatgaacgtctcgcggaaatggatttctgcaggagc
gcgcttgctcgcgactctgagacagcagcggtgtcgacattcgcgagcaagctcgctcct
gcaaaggcagccggcgaggcttcgcagaccacgtcaaggctccagcctgccatcgactgg
ctcatggacacactgggtctgcccgacgccgcagcccgccagatcgtcgaatatctggcg
cgcacgcgctccgcgctgggcgcgctgccgacgcagcagcggctgatcatggagcgcttc
ttcgacgaatccggcggcacccagctggtcattcattcgccgtacggcagccgcatcaac
cgcgcctggggtctggcgctgcgcaagcgcttctgtcgcaccttcaacttcgaattgcag
gctgccgcgacggaggatgcgatcatcttttcgctatccaccagtcacagctttccgctg
gaggaggtctggcggtacctgcattccaacagtgccgagggcgtgctgatccaggcgctg
ctcgatgcaccgctgttcggcgtgcgctggcgctggaacgccactacggcgctggcattg
ccgcgtatggctggcggacgcaaggtggcgccacagctgcaaaggatgaagagtgaggat
ttgctcgccacggtcttccccgatcaggtcgcctgcctggaaaacattgtcggcgagcgc
gagattcccgagcatccgctggtggcgcagacgctggatgactgtttgcacgacgccatg
gacagtgagggctggctggcgctgttacggcgcatcgagggcggcgagatcgaactgtcg
gcccgtgacctgccgatgccatcgccactggcaatggaagtgcttggcgcacgcccttac
gccttccttgatgatgcgcctctggaagagcgacgcacccaggcggtgctcaatcggcgc
tggagcgatccggaatccagcgacgacctcggtgccctggacgccgcagcaatcgaagcg
gtacgcgaggaggcctggccgcaagcgcgcaatccggacgaattgcacgaggcgctgatg
gggctggtttgcctggccgaagccgaggtgcaggccgacccgcagtggtccgagtggctg
agcgaattggcccgtggcggtcgcgcgacacggatgcaggtcgcgcaggagcgcgcgctc
tggttacccatcgaacgcctggctctgttgcaggcgatctaccccagcgcctgttgtgag
ccgaccctgacgccgttgccaggcttcgatctgccgtcgagcgaagacgacgcgttgctt
gagttgatccgcgcgcgattgacaggcttcggcccgttgcggatcccgctgatcgctcgg
ccgctggccttgcctgcgtcggccgtcgcgctggcgttgactcgactggagtccgaaggc
tacgtgctacgcggtcgcttcacgccagggacgagcgaagaagaatggtgcgaacgacat
ttgctggcgcgcattcaccgttacacggtcaagcgcctgcgccgtgaaatcgagccggtg
gagcgcgccgacttcatgcgattcctgttcgactggcagcatctttccgacgcgacgcgg
atgcaggggcgtgacgcgctcggcccggtagttgagcagcttgaaggcttccaggccgcc
gccggcgcttgggagaacgatctattgccggcgcgactgaaagattacggcgggccctgg
ctggacgaactctgccgctccgggcgcatcgtctggacccgcctggccggacgtatcaag
gccagcagcggtcctgtgcgcggtacaccgatcgtcttgctgccgcgccggcatctgtcc
gcctggtatgcgctggccagcgacgcaccgcagcccgagctgtcgtcacgcgcgcagcgg
gtattcgagacgttgcaggcgcagggcgcactgttcttcgacgagctgcaacacgaagcg
catctgctgcgcagcgagttggaggatgcgcttggcgagctggtcgccgtggggctggtc
aatgccgacagcttcgcgggcctgcgcgcgttgttggcgccggcggccaagcgatcacgc
agcagtcgtcaaagccgtggcggtgcctttatcggtggcatggccgatgccggacgttgg
gcgttggtacgcaaggccaccgcgacaacagccgatccagctcctgcacgccggccaccg
ctcgatcccgaagccctggaacacatcgccatggtgctgttgcgccgttatggcgtggtg
ttctggcggctgctggatcgcgaagcggactggctgccgccatggcgcgacctgctgcgc
gtctaccaccggctcgaggcgcggggcgagattcggggcggtcgcttcgttgccgggctg
ccgggcgaacagtttgcattgccggaggctgtcggcctgctacgagagatccgcaagcgg
ccgttgtcgggggaaatgatcgcggtctcggcggtcgatccgctgaaccaggtcgggacg
ctgctaccgggtgagcgcgtgccggcagtggcgggtaatcgcatcctctatcgcgacggg
gtgccgctgggtttgttgatcgccggcaaaccggagctgctggtagaactcgacgaagac
gatcagcgcaaggcgcggcagctgcttgcagtggcgcgtcgctag

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