Stutzerimonas stutzeri 28a24: CH92_17400
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Entry
CH92_17400 CDS
T03390
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pstt
Stutzerimonas stutzeri 28a24
Brite
KEGG Orthology (KO) [BR:
pstt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstt03400
]
CH92_17400
DNA repair and recombination proteins [BR:
pstt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CH92_17400
Archaeal homologous recombinant proteins
CH92_17400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AHL76773
UniProt:
W8RAT2
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All DBs
Position
3742252..3743487
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AA seq
411 aa
AA seq
DB search
MRLIHTSDWHLGQTLHGQDRDYEHAQFLAWLLGQLTEHQPDALLIAGDIFDTVNPPLKAQ
ERLYDFIVRAHEKLPQLDIVMIAGNHDSGGRIELPGPLMRRLNAHAIGRISWLADHSLDH
GRLLVPLHDAKGEVAGWCLALPFLRPAEVTGGEAGEDYMLGIRHVHQHLIAAAEAQRQPG
QALIAMSHAHMAGGAVSEDSERNIVIGNAEALPASLFPEPIAYVALGHLHKPQKVAGQER
IRYSGSPLPLSFGEINYPHQVLLVSFDGDQLSRIESLPVPRAVEMIRIGRAPLAEVISQL
AALPPVGLFAENLPWLEVRVQLDEPLPDLRQRIETELAGKACRLVRIASEYVGKRGEAES
EVLPGLDQITPQELFARAWEEQFGNPPDDQALEDFASLLQGVEFADEGETR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatccacacttccgactggcacctcggccagaccctccatggccaggaccgc
gactacgagcacgcgcagttcctcgcctggctgctcggtcagctgaccgaacatcagcca
gacgctctgctgatcgccggcgatatcttcgacacggtcaacccaccgctcaaggcacag
gaacggctctacgacttcatcgtccgcgcccacgagaaactgccacaactggatatcgtg
atgatcgccggcaaccacgactccggcgggcgcatcgagctgcccgggccattaatgagg
cgtctgaacgcccatgccatcggccgcatcagctggctggcggaccatagtcttgatcac
ggtcggctgctggtaccgctgcacgacgccaagggcgaggttgccggctggtgcctggca
ctgccctttctgcgcccagcggaagtcaccggtggtgaagcgggcgaggattacatgctc
ggcatccgtcacgttcaccagcacctgatcgcggccgctgaagcccagcgccagcccggc
caggcgctgatcgccatgagccacgcgcacatggccggcggtgccgtatcggaagattcg
gagcgcaatatcgtcatcggcaatgccgaagcgctgcccgccagcctgttccccgaaccc
atcgcctacgtcgcactcggccacctgcacaagccgcagaaggtcgccgggcaggaacgc
attcgttacagcggctcgccgttgccgctgtcgttcggcgagatcaactacccacatcag
gtgttgctggtgagtttcgatggcgaccagttgagtcggatcgaaagcctgccagtgccg
cgcgccgtggagatgatccgcatcggccgcgccccgctggccgaggtcatcagtcaactg
gcggctctgccgccggtgggcctgttcgccgaaaacctgccttggctggaggtgcgtgta
cagctcgacgaacctcttccagacctgcgccagcgcatcgaaaccgagcttgcaggcaaa
gcctgccggctggtgcgcatcgccagcgaatacgtcggcaagcgcggcgaggctgaatca
gaggtgcttccgggcctcgaccagatcacgccgcaggagctcttcgctcgcgcctgggag
gaacagttcggcaacccgccggacgaccaggcgttagaggacttcgccagcctcttgcaa
ggcgtcgaatttgccgatgaaggagaaacgcgatga
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