Stutzerimonas stutzeri 28a24: CH92_17405
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Entry
CH92_17405 CDS
T03390
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pstt
Stutzerimonas stutzeri 28a24
Brite
KEGG Orthology (KO) [BR:
pstt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstt03400
]
CH92_17405
DNA repair and recombination proteins [BR:
pstt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CH92_17405
Archaeal homologous recombinant proteins
CH92_17405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
nSTAND3
AAA_15
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AHL76774
UniProt:
W8R2D8
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All DBs
Position
3743484..3747140
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AA seq
1218 aa
AA seq
DB search
MKILAIRLKNLASLAGEQVIDFSAEPLASAGLFAITGPTGAGKSTILDALCLALFGSTPR
LDGASLLSKVPDGNDEIGSGDERNLLRRGCGSGYAEVDFVGVDQHRYRARWEVKRAREKV
DGRLQASNQSLLDLDRDQLLASGKKREFKELLEAKLGLTLAQFTRAVLLAQSEFSAFLKA
DDNDRGTLLEKLTDTGLYSRLGQAAFEAAKRAREVLTALQQQAGGVQPLEPEARQALEAQ
HQRQLAELKTLQQQLETLKQQSQWLQDMARLQGERDKARQQLADAETEHENLADARRILA
LFELLAPQRHRFLREQALAPLLAKVEENLARHGREHSAVQQRLDELEQLCKRSTDALKAA
EQTLKSAEPQLAQARREEERLSHLTNDLGDARRQTDQAEAASKAGEGSLAQLTQQQEQAA
TQLATLTDGLARSAELQPLCAAWNGYRPRLQQAVQIAARLQQGRQELPALETAAKTAEAA
QAHARQALDALQVEIGGETGLAEQLAQLNTRLDAWREAQREGESLFGLWSRQQQLANQQQ
ALLDEQSRQQQELVALTQAGKLARTERDDAEKALKVVQALLERQRLARSANVEALRAALA
PGEPCSVCGSLEHPWHDGKALLAALDQGDEREAEQAQLQLKHHDEKLQALRDQHIALTTG
IKQNGQRQTEIADELAKLEPQLAALPLYTELLTEPETERQSRLDGKLATLKTDIATASAR
QRDLLALQQRSETLQNDWQRARDSCVQATQALTGQREAIARDEERLDEELAEFATLLPAA
LLARWREAPAETFMQLDSQVEARRQQIDQQAEVAEEQQQRQTALEREQLQQQHRLDQQKA
CAARQADLEARELVCRQSLRDSLGEQASAQIWQQQLENAIQLARQQQAEIDRQLNEARVE
LTRLAGEQHNCAQRRAELLAERSTLSEELATWRAAHPDLDDATLEQLLQLDDTLLAEARE
RLRANTEQLARSRERLDGCEQRLKAHQASQPNPPNAETLEAQLSSQKASCDNTEQRSSET
RAVLLDDDRRRNQSRTLLEQIAAATAQSQRWGRIAALIGSSDGGAFRKIAQAYNLDLLVQ
HANVQLRQLARRYRLKRGGSPLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSKLKIESLFIDEGFGSLDPESLQIAMDALDSLQAQGRKVAVISHVAEMHERIPVQIQV
QRMGNGQSGLRIVGAGGL
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgcgatccgcctgaaaaatctcgcgtcactggccggcgaacaggtcatc
gatttcagcgctgaacccctggccagcgccggcctgttcgctatcaccgggcctacaggt
gccggcaaaagcaccatcctcgatgccttgtgtctggccttgttcggcagcacgccacga
ctcgacggcgcctcgctgctcagcaaggtgccggacggcaacgacgagatcggcagtggc
gacgaacgcaacctgctacgccgcggctgcggcagtggttatgcagaggtggatttcgtc
ggcgtcgaccagcatcgctaccgcgctcgctgggaggtcaagcgcgcccgcgagaaggtc
gacggccgtttgcaagccagcaaccagagcctgctcgacctggaccgcgaccagttgctg
gccagcggtaagaaacgcgagttcaaggagctcctcgaagccaagctcggcctgaccctg
gcgcagttcacccgtgccgtgctgctggcccaaagcgaattctcagcattcctcaaggcc
gacgacaacgaccgcggcaccctgctggaaaaactcaccgacaccggcctctacagccgc
ctcggccaggccgccttcgaagcggccaagcgcgcccgagaagtactcaccgccctgcaa
caacaggccggcggcgtgcagccactggaacccgaagcacgccaggcgctggaggcccag
caccagagacaactggccgaactcaagacgctgcaacagcagctcgaaacgctgaaacag
caaagccagtggttacaggacatggcccgcttgcaaggcgagcgcgacaaggccaggcag
cagctggccgatgctgaaaccgaacacgaaaacctggccgacgcccgccgcatcctcgcg
ctattcgagctcctggcaccacaacggcatcgcttcctccgcgagcaggcgctggcaccg
ctgctggcgaaggtcgaggaaaacctggcccgccatggtcgcgagcacagcgcagtgcag
cagcggctcgacgagctggagcagctctgcaagagatcgaccgatgcgttgaaagcagcg
gagcagacgctcaaatctgccgagcctcaactggcacaggcgcgccgggaagaggaacgc
ctgagccatctgaccaacgacttgggcgacgcgcggcgccaaaccgaccaggccgaagcc
gcaagcaaggccggcgaagggtccctggctcaattaacgcagcaacaggaacaggccgcg
acccagctggcgaccttgaccgatgggcttgcccgcagcgccgaattgcagccgttgtgc
gcagcctggaatggctaccggccccgcctgcagcaggccgtgcagatcgcggctcgcctg
cagcagggtcgtcaggaactccctgccctggaaaccgcagccaagacagccgaagccgca
caagcacacgcacgtcaggcgctcgacgcgctgcaagtcgagattggcggggaaacaggc
ctggccgagcagctcgcgcagctcaatacccggctcgacgcctggcgcgaagcccagcgc
gaaggtgaaagcctgttcgggctctggtcccgccagcagcaactggcaaatcagcaacag
gcattgctcgacgagcagagccgccagcagcaagaactcgtcgccctgacgcaagccggc
aagcttgctcgcacagaacgggacgacgcggaaaaggcgctgaaagtggtacaggccctg
ctggagcgccagcgcctggcccgcagcgccaatgtcgaggctttgcgcgcggcccttgcc
ccgggtgagccgtgcagcgtctgcggcagcctcgaacatccctggcatgacggcaaggcg
ctgctcgccgccctcgatcaaggcgacgagcgcgaagccgagcaggcccagctgcagctg
aagcatcacgacgaaaaactccaggcgttgcgcgaccagcacatcgccctgaccaccggc
atcaaacagaacgggcagcgacagacggagatcgccgacgagctggcgaagctggaaccg
caactggccgccctgcccctctataccgagctgctaacggagcctgaaacagagcgccaa
tccaggctcgacgggaagctcgccaccctgaaaaccgacatcgccacggccagtgctcgc
cagcgtgacctgctagcgctgcagcagcgcagcgaaaccctgcagaacgactggcagcgc
gcgcgtgacagctgcgtccaggctactcaggccctcaccggccagcgcgaggcaatcgcc
cgcgacgaggaacgcctggacgaagagctggccgaattcgccactctactacctgccgcc
ctcctggcccgctggcgcgaggcgcctgccgaaaccttcatgcagctcgacagtcaggtc
gaggcccggcgtcagcagatcgaccaacaggcagaagtcgccgaagagcaacagcagcgg
cagaccgcgttggagcgcgagcaactgcagcaacagcatcgtctcgaccagcaaaaggcg
tgcgcggcccgccaagccgacctcgaagcccgcgagctggtttgccggcagagcctgcgc
gacagtctgggcgagcaggccagcgcgcaaatctggcaacagcaactggaaaatgcgatc
cagctcgcccgccagcagcaggccgaaatcgaccggcaactgaacgaggctcgagtcgag
ctgacccggctcgcgggcgagcagcacaattgcgctcagcgccgtgccgagctgctggcc
gagcgcagcacgctcagcgaagaactcgcgacctggcgcgccgcccatcccgatctagac
gatgcaaccctggaacagctgttgcaattggacgacacgctgctcgccgaagcgcgtgaa
cgtctgcgcgccaacaccgaacagctcgcccgcagtcgcgaacgccttgacggctgcgag
cagcggctgaaggcgcatcaggcttcgcagccaaacccaccgaacgccgaaaccctggaa
gcccaactcagtagtcagaaagccagctgcgacaacaccgaacagcgctctagcgaaacc
cgcgccgtgttgctcgacgacgatcgccgtcgcaatcagagccgaaccctacttgagcaa
atcgccgcggcgaccgctcaaagccagcgctggggccgcatcgccgcgctgatcggctca
agcgatggcggcgccttccgcaagatcgcccaagcctacaacctcgacctcttggtccag
catgccaatgtgcaactgcgacagctggccaggcgttaccggctcaagcgcggcggcagc
ccgctggggttactggtaatggatacggaaatgggcgacgaactgcgctcggtgcattcg
ctgtcaggtggcgagactttccttgtctcgctggcgcttgcattaggcttggcctcgatg
gcgtcgagcaagctgaagatcgagtcgttgttcatcgacgaagggtttggcagcctcgac
cccgaatcgctgcagatcgccatggacgcgctggactcgctacaggcccagggtcgcaag
gtggcggtgatttcacacgtggcggaaatgcatgagcgcatcccggtgcagatccaggtg
cagcgcatgggcaatggtcagagcgggttgaggatcgtgggcgcgggcggactttga
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integrated database retrieval system
