KEGG   Stutzerimonas stutzeri 28a24: CH92_18030
Entry
CH92_18030        CDS       T03390                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
pstt  Stutzerimonas stutzeri 28a24
Pathway
pstt02024  Quorum sensing
pstt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pstt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CH92_18030
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CH92_18030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pstt03019]
    CH92_18030
   03036 Chromosome and associated proteins [BR:pstt03036]
    CH92_18030
Messenger RNA biogenesis [BR:pstt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CH92_18030
Chromosome and associated proteins [BR:pstt03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    CH92_18030
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AHL76877
UniProt: W8REF2
LinkDB
Position
complement(3881476..3881730)
AA seq 84 aa
MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPGRPVRLPAAGDAEQSESGND
NT seq 255 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcattcgctacaagacccttacctgaacactttgcgtaaggaacgcgtt
ccggtttccatctacttggtcaacggtatcaagctccagggtcagatcgagtcattcgac
caattcgtcatcctcttgaagaatactgtcagtcagatggtatacaagcatgctatttcg
accgttgttcccggccgtccggtgcgtctgccggcagctggcgatgcggagcagtccgag
tcgggtaacgactaa

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