KEGG   Stutzerimonas stutzeri 28a24: CH92_19465
Entry
CH92_19465        CDS       T03390                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pstt  Stutzerimonas stutzeri 28a24
Pathway
pstt02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pstt00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CH92_19465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pstt03021]
    CH92_19465
Transcription machinery [BR:pstt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CH92_19465
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_24 DUF4129 EutK_C Rv2175c_wHTH HTH_28 EAP30 Sigma70_r3 HTH_5 HTH_11 HTH_10 FaeA MerR
Other DBs
NCBI-ProteinID: AHL77134
LinkDB
Position
4190108..4190626
AA seq 172 aa
MSAGESPNQLFVDSLYRDHRDWLLSWLRRYQACPHRAEDLSQDTFLRLLKRNDLLGVREP
RALLATIARGLLIDHFRRSALERAYLDELALQPEDTQPSAEEQLQVIEALRQVNTLLGQL
SANARAAFFYNRLDGMTHGEIAQRLGVSVPRVRQYLAQALRQCYIAVYGEPT
NT seq 519 nt   +upstreamnt  +downstreamnt
ttgtcggctggtgagtcgcccaaccaactcttcgtggattcgctgtatcgcgatcatcgc
gactggctgctcagttggctgcggcgctatcaggcctgtccgcaccgcgccgaggacttg
agccaggacacctttctgcgcttgctcaaacgcaatgatctgctcggcgtgcgcgaaccg
cgcgcgttactggcgaccatcgcgcgcggcctgctgatcgatcatttccgtcgcagcgca
ctggaacgtgcgtatctcgatgagctggcgcttcagccggaagacacacagcccagcgcc
gaagagcaacttcaagtcatcgaagccctgcgtcaggtgaacaccctgcttggccagctc
tcggcgaatgcgcgtgcggccttcttctacaaccgcctggacggtatgacgcacggcgag
atcgctcagcgtctcggcgtttcggtccctcgcgtgcggcaatatctggctcaggcgctg
cgccagtgctacatcgcggtttacggcgagcccacatga

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