Stutzerimonas stutzeri 28a24: CH92_19465
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Entry
CH92_19465 CDS
T03390
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pstt
Stutzerimonas stutzeri 28a24
Pathway
pstt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pstt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CH92_19465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstt03021
]
CH92_19465
Transcription machinery [BR:
pstt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CH92_19465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_24
DUF4129
EutK_C
Rv2175c_wHTH
HTH_28
EAP30
Sigma70_r3
HTH_5
HTH_11
HTH_10
FaeA
MerR
Motif
Other DBs
NCBI-ProteinID:
AHL77134
LinkDB
All DBs
Position
4190108..4190626
Genome browser
AA seq
172 aa
AA seq
DB search
MSAGESPNQLFVDSLYRDHRDWLLSWLRRYQACPHRAEDLSQDTFLRLLKRNDLLGVREP
RALLATIARGLLIDHFRRSALERAYLDELALQPEDTQPSAEEQLQVIEALRQVNTLLGQL
SANARAAFFYNRLDGMTHGEIAQRLGVSVPRVRQYLAQALRQCYIAVYGEPT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggctggtgagtcgcccaaccaactcttcgtggattcgctgtatcgcgatcatcgc
gactggctgctcagttggctgcggcgctatcaggcctgtccgcaccgcgccgaggacttg
agccaggacacctttctgcgcttgctcaaacgcaatgatctgctcggcgtgcgcgaaccg
cgcgcgttactggcgaccatcgcgcgcggcctgctgatcgatcatttccgtcgcagcgca
ctggaacgtgcgtatctcgatgagctggcgcttcagccggaagacacacagcccagcgcc
gaagagcaacttcaagtcatcgaagccctgcgtcaggtgaacaccctgcttggccagctc
tcggcgaatgcgcgtgcggccttcttctacaaccgcctggacggtatgacgcacggcgag
atcgctcagcgtctcggcgtttcggtccctcgcgtgcggcaatatctggctcaggcgctg
cgccagtgctacatcgcggtttacggcgagcccacatga
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integrated database retrieval system