Stutzerimonas decontaminans: UIB01_00015
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Entry
UIB01_00015 CDS
T03366
Name
(GenBank) recombinase RecF
KO
K03629
DNA replication and repair protein RecF
Organism
pstu
Stutzerimonas decontaminans
Pathway
pstu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pstu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UIB01_00015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstu03400
]
UIB01_00015
DNA repair and recombination proteins [BR:
pstu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
UIB01_00015
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
AAA_13
AAA_16
DUF2813
Aq_aa27
ATPase_2
AAA_27
NfeD_C
Motif
Other DBs
NCBI-ProteinID:
AHY40915
UniProt:
A0A023WMI5
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Position
2704..3816
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AA seq
370 aa
AA seq
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MSLSRLSVTGVRNLHPVTLSPSPRINILFGDNGSGKTSLLEAIHLLGLARSFRSIRLNPV
ITYEQSACTVFGQVDLPDEHSRALGVSRDRSGEVRIRIDGNSVRSAAELADTLPLQLINP
DSFRLLEGAPKLRRQFLDWGVFHVERRFLTSWQRLQQALRQRNSWLRHGTLDGASDAAWS
RELTLASDEIDAYRRAYIQALKPVFETTLKALLELDGLKLSYYRGWDKDRPLADVLASSL
ERDRALGHTQSGPQRADLRLKVGNHNAAEVLSRGQQKLVVCALRIAQGHLVSEAKRGQCI
YLVDDLPSELDAQHRLALCKLLEQLNCQVFITCVDSTVLQAGWQEQTPVSMFHVEHGEIT
QVHGPSGVKA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttagtcgtctctccgtcaccggggtccgcaatctgcacccggtgacgttgtct
ccttctcctcgcatcaacatccttttcggtgacaacggcagcggtaaaaccagtctgctc
gaggccatccatctgcttggcttggcgcggtcttttcgcagcatccggctcaaccccgta
atcacgtacgagcaatctgcttgcaccgtcttcggtcaggtggatttgcccgatgagcat
agtcgcgcgctcggtgtctcgcgtgatcgaagcggtgaagtccggatccgtatcgacgga
aatagcgtgaggtcagcagccgaactcgccgatacgctcccgctgcagctaatcaatccc
gacagtttccgcctgctcgaaggcgcgcccaagctgcggaggcagttcttggattggggt
gtgttccacgtggaacgtcgttttctgacctcctggcagcgcctgcagcaggccctgcgg
caacgtaactcgtggctgcggcatggtacactggacggcgcttcggacgcggcctggagc
cgcgagctgaccctcgccagtgatgagatcgacgcctatcggcgggcctatatacaggca
ctgaagccggtcttcgagaccacgcttaaagcgttgctggagctggatggattgaagctt
agctattaccgcggatgggacaaagaccgcccattggcggatgtacttgcttcgtcgttg
gagcgggatcgtgcgttgggacatacccagtcaggtccgcagcgtgccgacctccgactg
aaagttggcaatcacaatgcggctgaagtgttgtcgcgcggccagcagaagcttgttgtc
tgtgcgttgcgcatcgctcaaggccatctcgtcagtgaggccaagcgcgggcaatgtatt
tatctggtcgatgacctgccgtccgagttggacgctcagcatcggctggcgctgtgcaag
ttgctcgagcaacttaactgtcaggtttttatcacctgtgtagattcaaccgttttgcaa
gcaggctggcaggaacagacgccagtctcaatgtttcacgtggaacatggggaaatcacc
caggtccacggcccctcgggagtgaaggcatga
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