Stutzerimonas decontaminans: UIB01_02625
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Entry
UIB01_02625 CDS
T03366
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
pstu
Stutzerimonas decontaminans
Brite
KEGG Orthology (KO) [BR:
pstu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstu03019
]
UIB01_02625
Enzymes [BR:
pstu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UIB01_02625
Messenger RNA biogenesis [BR:
pstu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
UIB01_02625
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
ResIII
AAA_30
Flavi_DEAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AHY41413
UniProt:
A0A023WMN0
LinkDB
All DBs
Position
567618..570140
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AA seq
840 aa
AA seq
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MNSLPIDEVLPALRQALQTRDEAVLEAPPGAGKTTRVPLALLGEAWLTGQSIVMLEPRRL
AARAAAERLASELGERVGETVGYRIRLDSKVGPNTRIEVVTEGILARRLQDDPALEGVGL
VIFDEFHERSLDADLALALTLNARQLLRDEPLKLLLMSATLEGQRLSALLDDAPVLRSEG
RMHPVKQRWGRAVASGERIEPRVVQTVLQALEDEPGSVLVFLPGQGEIRRVNEALADQLS
GRSDILLCPLHGELELAQQRAAIEPAPAGKRKVVLATNIAETSLTIEGVRVVVDAGLARV
PRFDPGTGMTRLETRRISRASATQRAGRAGRLEPGVCYRLWSEEQHAQLAAYGEAEILQA
DLAGVALQLARWGVEPGELAWLDRPPAAAYAQSQALLERLGALLRNDHGGWQLTRHGQAM
AELPTHPRLAHMLLRGQAMGMAALAADIAALLVERDLQRGGQRDGADLALRLHQLQDGRG
AGVQRVRQLARQFRGLLRSASTAATAEFDEQHALALLLAFAYPDRVARQRREGGGGYRLA
NGRAALFGEPDPLMKESWLVIAELGSHQGQREERIYRAVALDPMLFDGPLAEQVALHDEL
EWDEREGVLRAERQRRVGELVLSSEPLPSLDAEARGRALLGLVRRKGLELLPWTPELRQW
QARIGLLRQLDLTSANDSEWPDVSDAALLERLEDWLLPYLDKVTRLAHFAQLDLAGMLGT
LLPWPLPQRLEEQAPMAITVPSGSRIRLDYSEQPPVLAVRLQELFGLADTPRIAGGRQVV
KLHLLSPARRPVQVTQDLASFWANTYAEVKKDLKGRYPKHYWPDDPLIAEPTARAKPRGQ
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgaattccctaccgatcgacgaagtcctgccggcgttgcgccaggcgctacaaacgcgt
gacgaggccgtgctcgaagcgccgcccggcgccggcaagaccacccgcgtgccgctggcg
ctgctcggcgaagcctggctgacggggcagtccatcgtcatgctcgaaccgcgccggctc
gccgcccgcgctgcggccgagcggttggccagcgagctgggtgagcgggttggtgagacg
gtcggttaccgcatccgcctggacagcaaggtcggcccgaacacccgcattgaagtcgtc
accgagggcatccttgcgcggcggctgcaggacgacccggcgctggaaggcgtcggcctg
gtgatcttcgatgaatttcacgagcgcagcctggacgccgacctggccctggcgttgacg
ctcaacgcgcggcagctgctgcgcgacgagccgctgaagctgctgctgatgtcggcaacg
ctggaggggcaacgtctgtcggcgttgctcgacgatgcgccggtgctgcgcagcgaaggg
cgcatgcatccggtcaagcagcgttggggtcgcgccgttgcttcgggcgagcgcatcgag
ccgcgcgtggtgcagacggtgctgcaggcgctggaagacgagccgggcagcgtactggtg
ttcctgccggggcagggcgagatccgccgggtcaacgaggcgctcgccgatcagctgtca
ggacgtagcgacatcctgctctgcccgctgcatggagagctggaactggcgcagcagcgc
gcggccatcgagccggccccagcaggcaaacgcaaggtggtgctggcgaccaacatcgcc
gaaaccagcctgaccatcgaaggcgtgcgcgtggtagtggatgccggcctggcacgggtg
ccgcgcttcgatcccggtaccggcatgacgcgcctcgagacccgacgcatatcccgcgcc
tcggccacgcagcgcgcgggtcgcgccgggcgtctggagccaggggtgtgctatcggctg
tggtccgaagagcagcacgctcagctggcggcctatggcgaggcggaaatcctccaggcg
gatctcgccggtgtcgcgctgcagctggcgcgctggggtgtcgaaccgggcgagctggcc
tggctcgaccgtccgccagcggcggcttatgcccagtcccaagccctgctcgaacgcctc
ggcgcgctgctgcgcaatgatcacggcggctggcagctgacccgccacggccaggccatg
gccgagctaccgacacatccgcgcctggcgcatatgctgctgcgcggccaggccatgggc
atggctgcgctggctgccgatattgcggcgttgttggtcgagcgcgatctccagcgcggc
ggccagcgcgacggtgccgatctcgccttgcgcctgcatcagctgcaggatggtcgcggc
gctggggtgcagcgcgtgcgccagctggctcggcaattccgcggcctgctgcgcagtgcc
tcgacggctgccaccgccgagtttgacgagcagcacgccctggcgttgctgctcgccttc
gcctatccagaccgggtcgcccggcaacgtcgggaaggtggcggtggctatcgcctggcc
aatggtcgcgcagcattgttcggtgagccggacccgctgatgaaggagagctggctggtg
atcgccgagttgggtagccatcagggccagcgcgaggagcgcatctaccgcgccgtggcg
ctggacccgatgctgttcgatggtccgctggccgagcaggtcgccttgcatgacgagctg
gaatgggacgagcgtgagggtgtgctgcgtgccgagcgacagcgccgggtcggcgagctg
gtgctgagtagtgagccgctgccctcgcttgacgcagaggcgcgcggtcgcgcattgctc
ggtctggtgcgacgcaagggtctggagctgctgccctggacaccggagctgcgccagtgg
caggcgcgtatcggcctgctgcgtcagctcgatctgacttccgctaatgacagcgaatgg
ccggacgtcagcgatgccgcgctgctggagcggctggaagactggttgctgccctatctg
gacaaggttacgcggctggcgcacttcgcccagctcgatcttgccgggatgctcggcaca
ctgctgccctggccgctgccgcagcgcttggaggagcaggcgccgatggcgataacggtg
ccatccgggtcacgcattcgcctcgactacagcgagcagccgccggtgctggcggtgcgc
ttgcaggaactgttcggtctggccgacaccccgcgcatcgccggcggccggcaggtcgtc
aagctgcacctgctctcgccggcgcgccgcccggtgcaggtcacccaggatctggcgagt
ttctgggcgaacacctacgccgaggtaaagaaggatctgaaggggcgttatcccaagcat
tactggccggatgacccgctgatcgccgagcccaccgcgcgagcaaagccacgcggacag
tag
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