Stutzerimonas decontaminans: UIB01_03805
Help
Entry
UIB01_03805 CDS
T03366
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pstu
Stutzerimonas decontaminans
Pathway
pstu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pstu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UIB01_03805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstu03019
]
UIB01_03805
Enzymes [BR:
pstu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UIB01_03805
Messenger RNA biogenesis [BR:
pstu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UIB01_03805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
AHY41633
UniProt:
A0A023WNC0
LinkDB
All DBs
Position
827707..829032
Genome browser
AA seq
441 aa
AA seq
DB search
MTFASLGLIDPLLRTLETLDYRKPTPVQAEAIPAVLKGRDLMAAAQTGTGKTAGFALPLL
QRLTMHGAKVASNSVRALVLVPTRELAEQVHESFRVYGQNLPLRTYAVYGGVSINPQMMA
LRKGIDVLVATPGRLLDLYRQNAVGFNQLQALVLDEADRMLDLGFADELDQLFSALPKKR
QTLLFSATFSEPIRQMARELLRDPLSVEVSPRNAAAKTVKQWLVPVDKKRKSELFLHLLA
DKRWGQVLVFVKTRKGVDQLVDELQAAGISSDAIHGDKPQASRLRALERFKAGEVQVLVA
TDVAARGLDIHDLPQVVNFDLPIVAEDYVHRIGRTGRAGATGEAVSLVSADEVDQLAAIE
TLINQVLPRHDELGFVPDHRVPTTTLGGQIIKKPKKPKKPKDAGGKGKIHLGNWFDESEK
PNAKPIRKVPSLGGGKPAKKR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgcctccctgggcctgatcgatccgctgctgcggaccctggaaaccctcgac
tatcgcaagccgacgccggttcaggccgaagccatacctgccgtgctcaagggccgcgac
ctgatggcggcggcgcagaccggcaccggcaagaccgccggtttcgccctgccattgctg
cagcgcctgaccatgcacggcgccaaggtggcaagcaattcggtgcgcgcgctggtactg
gtgccgacccgcgagctggccgagcaggtccacgagagctttcgcgtgtacgggcagaat
ctgccgctgcgcacctacgcggtgtacggcggggtcagcatcaatccgcagatgatggcg
ctgcgcaagggcatcgacgtgctggtggcgacgcccggtcgcctgctcgatctgtaccgg
cagaatgcggtgggcttcaatcagctgcaggcgctggtgctcgacgaggccgatcgcatg
ctcgatctgggctttgccgatgagctggaccagctgttctcagccctgccgaagaagcgc
cagaccctgctgttctccgcgaccttttccgagccgatccggcagatggcccgcgagctg
ctgcgcgatccgctgtcagtcgaggtcagcccgcgcaatgccgcggcgaagacggtcaag
caatggctggtgccggtggacaagaagcgcaagagcgaactgttcctgcacctgctggca
gataagcgctggggccaggtgctggtgttcgtcaagacgcgcaagggcgtcgatcagctg
gtcgacgagctgcaggctgcgggcatttccagcgatgcgatccacggcgacaagccacag
gcctctcgactgcgggcgctggagcgcttcaaggcgggcgaagtgcaggtgctggtggcg
accgatgtcgccgcgcgcgggctggacatccatgatctgccgcaggtggtcaacttcgac
ctgccgatcgtcgccgaggattacgtgcaccgcatcggccgtaccggtcgcgccggcgcc
acgggcgaagcggtttccctggtcagtgccgatgaagtcgatcagctcgccgccatcgaa
accctgatcaaccaggtgctgccgcgccacgacgagctgggcttcgtgccggaccatcgt
gtgccgaccaccacactgggcgggcagatcatcaagaagccgaagaaaccgaaaaagccc
aaggatgccggcggcaagggcaagatccatctcggcaactggttcgacgagagcgaaaag
cccaacgccaaacccattcgcaaggtgccgagcctgggtggtggcaagcctgcgaagaag
cgctga
DBGET
integrated database retrieval system
