| Entry |
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| Name |
(GenBank) RNA polymerase-associated protein RapA
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| KO |
| K03580 | ATP-dependent helicase HepA [EC:5.6.2.-] |
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| Organism |
pstu Stutzerimonas decontaminans
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| Brite |
KEGG Orthology (KO) [BR:pstu00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pstu03021]
UIB01_06195
Transcription machinery [BR:pstu03021]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
UIB01_06195
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(1317732..1320581)
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| AA seq |
949 aa
MAQQYLPGQRWISDSEAELGLGTILTQDGRMLTVLYPATGETRQYATRSAPLTRVRFVPG
DEITHFEGWKMTVREVDDVDGLLIYHGLTAQNEARTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYYTLQHQSAQLQSSLWGLGGVRAQPIAHQLHIAKEVADRIAPRVLLADEVG
LGKTIEAGLIIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLEVALFDAERFIESDA
SNPFEDTQLALVSLEWLKEDERAQDAAFAAGWDVLVVDEAHHLVWHPEGASAEYKLVEQL
AEVIPGVLLLTATPEQLGLDSHFARLRLLDPNRFHDLEAFRAESSSYQPVAEAVQELLDE
GRLSQQAHQTIHDFLGAEGEALLAAATDGDIEASSRLIRELLDRHGTGRLLFRNTRAAVQ
GFPERQLHPYPLPCPAEYLELPLGEHAELYPEVAFQSQQDDGEASNRWWQFDPRVEWLID
TLKMLKKFKVLVICAHAETALDLEDALRVRSGIPATVFHEGMSILERDRAAAYFADEEFG
AQVLICSEIGSEGRNFQFSHHLVLFDLPAHPDLLEQRIGRLDRIGQQHTIQLHVPYLETS
PQERLFQWYHQALNAFLNTCPTGNALQHRFGPQLLAQLEEGDDDTYQQLIDEARAERERL
EAELHSGRDRLLELNSGGGEQGKALVEAIEEQDDQFALPIYMEQLFDAFGIDSEDHSENA
LILRPSEKMLDASFPLGDDEAVTITYDREQALAREDMQFLTWEHPMVQGGMDLVLSGSMG
NTAVALIKNKALKPGTVLLELLFVSEVVAPRALQLSRFLPPLALRCLLDGNGNDLASKVA
FDTLNDQLESVPRASANKFVQAQRDVLATQIAAAEAKIAPRHSERVAEAQRKLKAGLDEE
LARLVALQAVNPSVRDSEIEALRRQREDGQAALEKAALRLEAIRVLVAG |
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| NT seq |
2850 nt +upstreamnt +downstreamnt
atggcgcagcagtatctaccggggcaacgctggatcagcgacagcgaggcagaactcggc
ctcggaaccatcctgacccaggatggacggatgctcaccgtgctctacccggcgaccggc
gaaacgcgccagtacgccactcgcagcgccccattgacgcgggtgcgcttcgttcccggc
gacgagatcacccatttcgaaggctggaagatgaccgtgcgcgaggtcgacgacgtcgac
ggcctgctgatctaccacggtctgaccgcacagaacgaagcccgcaccctgccggaaacc
cagctgtccaacttcatccagttccgcctggccagcgaccgcctgtttgccgggcagatc
gacccgctcgcgtggttcagcctgcgctactacaccctgcaacaccagagcgcccagttg
cagtcttcgctgtggggcctcggcggcgtgcgtgcgcaacccattgcgcaccagctgcac
atcgccaaggaagtcgccgaccgcatcgctccgcgcgtgctgctggccgacgaagtgggc
ctgggcaagaccatcgaagccggcctgatcatccatcgccagttgctctccggccgcgcc
aaccgggtgctgatcctggttccggaaaacctccagcaccagtggctggtggagatgcgc
cgccgcttcaacctggaagtcgccctgttcgatgccgagcgcttcatcgaaagcgatgcc
agcaacccgttcgaggacacccagctggcactggtttcgctggaatggctgaaggaagac
gaacgcgcccaggatgccgcctttgccgccggctgggacgtgctggtggtggacgaagcg
caccatctggtctggcacccggaaggtgccagcgccgaatacaaactggtcgaacagctg
gccgaagtgatccccggggtgctgctgctgactgcaactccggaacagctcggtctggac
agccacttcgcccgtctgcgcctgctcgacccgaatcgcttccacgacctcgaagccttc
cgcgccgaaagctccagctatcagccggtggccgaagccgtgcaggagctgctcgacgag
ggccgtctctcgcagcaggcacaccagaccattcacgatttcctcggcgccgagggcgaa
gccctgctcgccgccgccactgacggcgacatcgaggccagcagccgcctgatccgcgaa
ctgctcgaccgtcacggcaccggccgcctgttgttccgcaatacccgtgccgccgtgcag
ggtttcccggagcgccagctgcatccgtatccgctgccctgcccggccgaatacctggag
ctgccgctgggcgagcacgccgagctgtatccggaagtcgccttccagagccagcaggac
gacggcgaggcgagtaaccgctggtggcagttcgatccgcgtgttgaatggctgatcgac
acgctgaagatgctgaagaagttcaaggtgctggtcatctgcgcccatgccgaaaccgcc
ctcgatctggaagacgcgctgcgcgtgcgctccggcattccggccacggtgttccacgag
ggcatgagcatcctcgaacgcgaccgcgccgcggcgtacttcgccgacgaggaattcggc
gcgcaggtgctgatctgttcggagatcggcagtgaaggccgcaacttccagttcagccac
catctggtgctgttcgacctgccggcgcacccggacctgctcgagcagcgcatcggccgt
ctcgaccgcatcggccagcagcacaccatccagctgcacgtgccgtacctggaaaccagc
ccgcaggaacgcctgttccagtggtatcaccaggccctgaacgccttcctcaacacctgt
ccgaccggcaatgcactgcagcatcgcttcggtccgcagctgctggcacagctggaagaa
ggtgacgatgacacctatcagcagctgatcgacgaagcacgcgccgagcgcgagcgtctg
gaagccgaactgcacagcggtcgcgatcgcctgctggagctcaactccggcggcggcgaa
caaggcaaggcgctggtcgaagcgatcgaggagcaggacgaccagttcgctctgccgatc
tacatggagcagctattcgacgcgttcggtatcgacagcgaggaccactcggaaaacgcc
ttgatactgcgccccagcgagaaaatgctggatgccagtttcccgttgggtgacgacgag
gcagtgaccatcacctatgaccgcgagcaggccctggcccgtgaagacatgcagttcctc
acctgggaacaccccatggtgcagggcggcatggacctggtgctgtccggctccatgggc
aacaccgcggtcgcgctgatcaagaacaaggcgctcaagccgggcaccgtgctgctggag
ctgctgttcgtcagtgaagtggtggcgccgcgcgcgctgcaactgagccgcttcctgccg
ccgctggcgctgcgctgcctgctggacggcaacggcaatgacctggcctcgaaggtggcc
ttcgatacgctcaacgatcagctggaaagcgtgccgcgggccagcgccaacaagttcgtt
caggcccagcgcgacgtgctggcgacgcagatcgccgccgccgaagccaagattgcaccg
cgtcacagcgagcgcgttgccgaggcgcaacgcaagctcaaggccggcctggacgaggaa
ctggcgcgcctggtagccctgcaggcggtcaatccaagcgtgcgcgacagcgagatcgaa
gccctgcgtcggcagcgcgaagatggccaggcggcactggaaaaggcggccttgcggttg
gaagcgatacgagtgctggtcgccggttga |
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