Stutzerimonas decontaminans: UIB01_10900
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Entry
UIB01_10900 CDS
T03366
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pstu
Stutzerimonas decontaminans
Brite
KEGG Orthology (KO) [BR:
pstu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pstu03032
]
UIB01_10900
03400 DNA repair and recombination proteins [BR:
pstu03400
]
UIB01_10900
Enzymes [BR:
pstu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
UIB01_10900
DNA replication proteins [BR:
pstu03032
]
Prokaryotic type
DNA Topoisomerases
UIB01_10900
DNA repair and recombination proteins [BR:
pstu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UIB01_10900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AHY42950
UniProt:
A0A023WTC6
LinkDB
All DBs
Position
complement(2300759..2301868)
Genome browser
AA seq
369 aa
AA seq
DB search
MRNDSLMDEPPPLAEGTRPVPVDETGDTGTLLCPTLPPDLHYVDDSQPGISRKVQRGKFV
YFEPNGERIRNEDEIRRINKLVIPPAYRDVWICPDPQGHLQATGRDARGRKQYRYHTRWR
EIRDSDKYERMLEFGEALPDLRRNLEKHLALPGMPRQKVMALVVMLLESTLIRIGNSRYA
RDNRSYGLTTLRTRHVDIRGTSIRFHFRGKSGVEHQVTLRDRRLARLMRRCMELPGQQLF
QYLDGDGQRRAVSSGDVNLYLREMTGRDFTAKDYRTWAGSALALERLRKLDAAPESVAKQ
NLVDTVKQVAQQLGNTPAVCRQCYIHPAILQAFGAGDLAELRAARKRKWLSAEEVALLNF
LRAQQTDQA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacgatagcttgatggatgaacctccaccgctcgccgaaggcacccgccccgtt
cccgtcgacgaaaccggcgacaccggcaccctgctttgcccgaccctgccgccggatctg
cattacgtcgacgactcgcagccaggcatcagccgtaaggttcagcgtgggaaatttgtc
tacttcgagccgaacggcgagcggattcgcaacgaagacgagataaggcgcatcaacaag
ctggtaataccgccggcttatcgtgacgtatggatctgccccgaccctcaggggcatttg
caggccaccggacgtgatgcgcgtgggcgcaaacagtatcgttaccacacccgctggcgt
gaaatccgcgacagcgacaagtacgaacggatgctcgaattcggcgaggcattgccggac
ctacgccgcaatctggaaaagcatctcgcgctgcctggaatgccacgtcaaaaggtcatg
gcactggtcgtcatgctgctcgaatcaacactgatccgcataggcaattcacgctatgcg
cgagacaatcgatcctatggcctgaccaccctacgcacgcggcacgtggacatccgcggc
acctcgatccgctttcatttccgcggcaagagcggtgtggaacaccaggtgaccctgcgt
gaccgccgcttggcgagactcatgcgacgctgcatggagctgccgggccagcaactcttt
cagtatctggacggcgatggccagcgccgcgccgtcagttccggggacgtgaatctctat
cttcgcgagatgactggccgtgatttcactgccaaggactaccgcacttgggccggtagt
gctctggccctggaaaggctacgcaagctggacgctgccccggaaagcgtcgcgaaacag
aatcttgtcgatacagtcaaacaggtcgcccagcagctgggcaataccccggcggtttgc
cgtcagtgctatatccatccggcgatcctgcaagcatttggagcgggcgatctggccgag
ctacgggcggcgcgcaagcgcaaatggctgagtgccgaagaggtcgccttgctaaatttt
ctgcgtgcgcagcagaccgatcaggcgtga
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