Stutzerimonas decontaminans: UIB01_16360
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Entry
UIB01_16360 CDS
T03366
Symbol
sbcB
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
pstu
Stutzerimonas decontaminans
Pathway
pstu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pstu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
UIB01_16360 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstu03400
]
UIB01_16360 (sbcB)
Enzymes [BR:
pstu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
UIB01_16360 (sbcB)
DNA repair and recombination proteins [BR:
pstu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
UIB01_16360 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UIB01_16360 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UIB01_16360 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AHY43962
UniProt:
A0A023WUT5
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All DBs
Position
complement(3463191..3464627)
Genome browser
AA seq
478 aa
AA seq
DB search
MTPSIFWYDFETTGISPSRDRPLQVAGIRTNEALEEIGEPLNIYCRPSDDILPHPAACLV
TGITPSVLQQKGLCEAEFIQRLHQQLSTPGTCGAGYNSLRFDDEVTRYSLYRNFYDPYAR
EWQGGNSRWDLIDLVRTAYALRPEGIAWPEEDGRVTLKLERLSVANGLEHLNAHDALSDV
RATIGLARLIRDRQPRLYDYLFSLRRKQAVLDQITLLEPLVHVSGRFSAARHYLSVVLPL
GWHPRNRNALIVCDLQADSQPLLQETSETLRQRLYTRRDQLAEGELPVPLKLVHINKCPV
LAPLKVLREADIQRLALDMPLCQARAAALREQRQVWSGKLEEIYREEGFVGSEDPEQQLY
DGFLGDRDRRLCDQVRSLAPAELAGYPCRFDDARLEELLFRYRARNFPEALSAEEQAQWR
RFCQQRLSDDAYGAPNTLAQFEAGIEQSMVTATPAQQQLLQQWRDYGLGLRERYGLAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccaagcatcttctggtacgacttcgaaaccaccgggatctcccccagccgcgac
cgcccgttgcaagtggcgggcattcgcaccaacgaggcgctcgaggaaattggcgagccg
ctgaacatctactgtcgcccctcagacgacattcttccgcatcctgccgcgtgcctggtt
actggaatcacgccgtcagtcttgcaacagaaaggattgtgcgaagcggagttcatccag
cgtctgcatcagcaactgtccacgcccgggacctgcggtgccggttataacagcctgcgc
ttcgacgatgaggtgacccgctacagcctataccgcaacttctacgatccttacgcgcgt
gaatggcagggcggcaacagtcgttgggatctgatcgacctggtgcgtaccgcttatgcg
ttacgtccggagggtatcgcctggcctgaggaggatggccgggtgacgctcaagcttgag
cgcctgagcgtggctaacgggctggagcacttgaacgctcacgacgccctgtccgatgtg
cgcgccaccattggcctggccagactcattcgagatcgccagccacggctgtatgactat
ctcttcagcttgcggcgcaaacaggctgtgctcgaccagatcactttgctcgagccgctg
gtgcatgtgtccggccgtttttcggcagcacggcattatctttccgtggtgctgccgctg
ggctggcatccgcgcaatcgcaatgcattgatcgtctgcgatctgcaggcagattcccag
ccgctcttgcaggaaacctccgaaaccttgcggcagcgcctttatacccgtcgcgatcaa
ctcgccgaaggcgagctgccggtgcccttgaagttggtacacatcaacaagtgtccggtg
ctggcaccgctcaaggtgctgcgcgaagcagatattcaacggctggctctggatatgccg
ctctgccaggctcgcgccgctgcattacgtgagcaacggcaagtctggagcggcaagctg
gaggagatctatcgtgaggaaggcttcgtcggaagcgaagaccccgagcaacagctgtat
gacggttttctcggcgaccgcgaccggcggctgtgcgaccaagtccgcagcctggctcct
gccgagctggcgggatatccgtgtcgattcgacgatgctcgcctcgaggagctgttattc
cgttaccgcgcacgaaacttccccgaagcgttatccgctgaggagcaagcgcagtggcgt
cggttctgccagcaacgactgagcgatgatgcctacggagcacctaacacgcttgcacag
ttcgaggcgggtattgagcaatccatggttactgccacgcccgcgcagcaacaactgtta
cagcaatggcgcgactacggcctagggctgcgcgagcgctacgggctggctaactag
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