Stutzerimonas decontaminans: UIB01_17575
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Entry
UIB01_17575 CDS
T03366
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pstu
Stutzerimonas decontaminans
Pathway
pstu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pstu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UIB01_17575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstu03400
]
UIB01_17575
Enzymes [BR:
pstu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
UIB01_17575
DNA repair and recombination proteins [BR:
pstu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UIB01_17575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Jas_motif
Motif
Other DBs
NCBI-ProteinID:
AHY44179
UniProt:
A0A023WWI6
LinkDB
All DBs
Position
complement(3716869..3720321)
Genome browser
AA seq
1150 aa
AA seq
DB search
MQEHQPGLVVIHGNHLEELRALAVQWMRSHPLHPLENEVLLVQSNGIAQWLKLALAEDPH
KGGCGIAAALDVQLPARFLWQVYRGVLGAQTTPQSSPLDKAALSWRLMRLLPSLLTNPVF
ASLQRFLEKDDEQRKLHQLCERLADLFDQYQVYRADWLEDWAAGRDQLQHIKGTVQPLDA
PNLWQAQLWREVLADVGEGALEQSRAGVHKRFVAHLRSAAQAPKGLPRRVVVFGISSMPA
QVLEALKELSRYSQVLLCVHNPCRHHWGDIVADKDLLAHHYRRQPAREVAAAANEHGQPL
LAAWGKQGRDYINLLDYHDEPGSYRHLLDGLNGGRIDLFTEPDTATLLGQLQSDILELRP
LPETREAWGAVDATADRSLRFHVVHSMQREVEVLHDQLLARFSADKQLSPRDVIVMVPDI
NAYTPHIEAVFGQVPRSDSRYLPFTVADQGQRGRQPLLIALEHLLKLPHSRFAASDILDL
LDVPALRARFTINEADVPTLQRWIDGAGVRWGLDAEQRESLGMPAGLEQNTWRFGMRRML
LGYAAGRAPQLNGIEPYDEVSGLEAALAGPLLTLLDHLEVALQELQQPATPVQWAERLQA
LLKVFFRPVNDTEELLVNQLLKLLEGWLRTCEVAQFAQPLPLSVVHEAWLSGIEDSGLSQ
RFLAGAVNFCTLMPMRAIPFKVVCLLGMNDGDYPRQQSPVDFDLMRNDYRPGDRSRREDD
RYLLLEAVLSARKQLYVSWVGRNIRDNSERVPSVLIGQLRDHLASGWRSANGQPLLPALT
QEHPLQPFSAAYFANEPGPDGLFTYSSEWREVHDEYSSQPAGERLPALVQDTPLSLRQLS
EFVRDPVGAFFSQRLKVKFDDDELVNRDDEAFQLDGLENWQHQDRLTQALKRWVEEAYDP
EQAVTELGLQVQRLQREGALPLGGFGTLSASALVEPMPGLLARYHAQLQAWPELEEGQSA
ATIEATDERPGLKDWLGGIRRNALDERAYLQLDSKKLCSDDSLRWQHLVRPWLRHLALQL
NGPACTTILVGLNGDVVFRPVPETQAREQLQALLQAWVAGMQEPLPVACESAFAWLAAGG
ESSDSAYDKARDIYEGGYMKKGEVERSFAQRRAYEDFDQLCASGQFVAWAQRLYGGLFGH
FTSTDAGSAQ
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagcatcagcctggtcttgttgtcatccatggcaatcatctagaagaactgcga
gcccttgcagtgcagtggatgcgcagccacccgctacatccgctggagaacgaggtgctg
ctggtgcaaagcaacggtatcgcccagtggctgaaactggcgctggccgaagacccgcac
aagggtggctgcggcattgctgcggcgctggatgtgcagttgcctgcgcgctttctgtgg
caggtgtatcgcggggtgctgggggcgcagaccacgccgcagtcctcgccgctggacaag
gcagcgctgagctggcggctgatgcgcctgctgcccagcttgctcacgaacccggttttc
gcaagcctgcagcgctttttggaaaaggacgatgaacagcgcaagctgcaccaactgtgc
gagcggttggcggacttgttcgaccaataccaggtgtaccgcgccgattggctcgaagac
tgggctgccgggcgggatcaacttcaacacatcaagggcactgtgcagccattggatgcg
ccgaacctgtggcaggcgcagctatggcgcgaggtattggccgacgttggcgagggcgcg
ctcgagcaaagccgcgccggggttcacaaacgcttcgtcgcccacctgcgcagcgctgcc
caggcgccaaaggggctgccacgcagggttgtggtgttcggcatttcctcgatgcctgcg
caggtgctcgaagccctgaaagagctttcccgctacagccaggtgctgctgtgcgtgcac
aacccttgccggcaccactggggcgatatcgttgccgacaaagacttgctggcgcaccac
taccgccgccaacctgcccgtgaggttgccgcagctgcgaatgagcacggccaacccttg
ctcgccgcctggggtaagcaggggcgcgactacatcaacctgctcgactaccacgacgag
cccggcagctatcgccacctgctcgatggcctcaatggcgggcgtatcgacctgttcacc
gagccggatacggcaaccctgctaggccagctgcaaagcgatattcttgagctgcgcccg
ttgccggaaacccgcgaagcctggggggcggtagacgctaccgccgaccgctcgctgcgt
tttcacgtggtgcacagcatgcagcgcgaagtggaggtgctgcacgaccaactgctcgcc
cgcttcagcgccgacaagcagttgagcccacgggatgtgatcgtgatggtgccggacatc
aacgcctacacccctcacatcgaggcagtgttcggccaggtgccaaggagtgattcgcgc
tacctgccgtttaccgtggccgaccaaggccagcgcggccgccagccgctgctgattgcc
ctggaacacctgctcaagctgccccatagccgcttcgctgccagcgacattcttgacctg
ctggacgtaccggccttgcgcgcgcgtttcacgatcaacgaagccgacgtacccacactg
caacgctggatcgacggtgccggtgtgcgctgggggctcgatgccgagcagcgcgaaagc
ctgggcatgccggcgggcctcgagcagaacacctggcgcttcggaatgcgacgcatgctg
ctgggctacgctgctgggcgagcgcctcagctcaacggcatcgaaccctacgacgaagtg
tcggggctggaagctgccctggccgggccgctgctgaccttgctcgaccacctggaagtg
gcccttcaggaactccagcaaccggccacgccggtgcaatgggcagagcgcctgcaagcc
ttgttgaaggtgttcttccgcccggtaaacgatacagaggaactgctggtcaaccaattg
ctcaagctgctcgaaggttggctgcgcacctgcgaggtggcgcagttcgcgcagccactg
ccactgagcgtggtgcacgaggcctggctcagcggtatcgaagatagcggcctgtcgcag
cgcttcctggccggcgcggtgaacttctgcaccctgatgcctatgcgggcgattccgttc
aaggtggtgtgccttctgggcatgaatgatggcgattacccgcgccagcaatcaccggtc
gatttcgacctgatgcgcaacgactaccgccctggcgataggtcgcgacgtgaagatgac
cgctacctgttgctggaggccgtgctgtcggcgcgaaaacaactgtatgtgagctgggtg
ggccgcaacatccgcgacaacagcgagcgtgtgccctcggtgctgattggccaattgcgc
gaccacctggccagcggctggcgctcggccaacggccagccattgctgccagcgctgacc
caggagcacccgttgcaacccttcagcgccgcctacttcgccaacgagccggggcctgat
ggcttgttcacctactccagcgagtggcgcgaggtgcatgacgaatacagctcgcagcca
gcaggggagcgcctgcccgcgctggtgcaggacacgccattgagcctgcggcaactttcc
gagttcgtgcgcgacccggtgggcgctttcttcagccagcggttgaaggtcaaattcgac
gacgacgagttggtaaaccgcgatgacgaagccttccagctcgatggcctggaaaactgg
cagcaccaggacaggcttacccaggcgctgaagcgctgggtcgaggaggcttacgacccc
gaacaggccgtgaccgaactgggcctgcaagtgcaacgcctgcaacgcgagggcgccttg
ccactgggcggcttcggcaccttgagcgcctcggcgctggtggagccgatgccgggcctg
ctggcgcgctaccacgcccaactgcaagcctggcctgagcttgaagagggccagagcgcc
gcaaccatcgaagccactgacgagcgtcccggcctcaaggattggctgggtggcattcgc
cgcaatgcgttggatgagcgagcctacctgcaactggacagcaagaagctgtgcagcgac
gacagcctgcgttggcagcacctggtgcggccttggttgcggcacttggcgttgcagttg
aacgggcctgcctgcacgaccattctggtgggtttgaatggcgatgtggtgttccggcca
gtgcctgaaacccaggcccgggagcagctgcaagcgctgctccaggcctgggtggcgggc
atgcaagagccgctgccggtggcctgcgaaagcgccttcgcctggttggcagcgggtggg
gaaagcagcgattcggcctacgacaaagcgcgcgatatctatgaaggcggctacatgaaa
aagggtgaagtggagcgctcgttcgcccaacggcgtgcctacgaggacttcgaccaactg
tgcgcgagcggccagttcgtggcctgggcccagcgcctgtatggcggcttgttcggccac
ttcacctcgaccgacgcaggaagcgcccaatga
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