Stutzerimonas decontaminans: UIB01_17910
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Entry
UIB01_17910 CDS
T03366
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pstu
Stutzerimonas decontaminans
Brite
KEGG Orthology (KO) [BR:
pstu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstu03400
]
UIB01_17910
DNA repair and recombination proteins [BR:
pstu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UIB01_17910
Archaeal homologous recombinant proteins
UIB01_17910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
AHY44240
UniProt:
A0A023WWX4
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Position
3792995..3794230
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AA seq
411 aa
AA seq
DB search
MRLIHTSDWHLGQTLHGQDRDFEHAQFLAWLLDQLVAHRADALLIAGDVFDTVNPPLKAQ
ERLYDFIVRAHEKLPQLDIVMIAGNHDSGGRIELPAPLMKRLNAHAVGRISWVDEGQLDH
QRLLVPLHDANGNTAAWCLTLPFLRPAEVTGMELGDDYMTGIRQVHERLIAAAESTRQPG
QALVAMSHAHMAGGAVSEESERNIVIGNAEALPASLFPESVAYVALGHLHKPQQVAGQAR
IRYSGSPLPLSFAEVNYPHQVLLVELDGDQLKNVEQLPVPRAVEMIRIGRASLAEVIAAL
EALPPTGLFDDHLPWLEVRVLLDEPLPDLRQRIETTITGKACRLVRIASEYAGKRGEAES
EVLLGLDQITPQELFARAWEAEYGNPADDQALDDFATLLQRVEFAHAEGDQ
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatccacacctccgactggcacctcggccagaccctccatggccaggaccgc
gacttcgaacacgcgcaattcctcgcctggctgctcgaccagctggtagcccaccgcgcc
gacgccctgctgatcgccggcgacgtgttcgacacggtcaacccgccactcaaggcccag
gaacgcctctacgacttcatcgtccgtgcccacgaaaaactcccgcagctggacatcgtg
atgatcgccggcaaccacgactcgggcgggcgcatcgagctgccggcaccgctgatgaag
cgcctcaacgcccatgccgtcgggcgcatcagctgggtcgacgagggccagctcgatcac
caacgtctgctggtgccgctccacgacgccaatggcaacaccgccgcctggtgtctcacc
ctgcccttcctgcgtccggccgaagtcaccggaatggaactgggcgacgactatatgacc
ggaatccgccaggtccacgagcggctgatcgctgctgccgaatccacacgccagcccggc
caggcgctggtcgccatgagtcacgcgcacatggccggcggcgcggtgtcggaggagtcc
gagcgcaacatcgtcatcggcaacgccgaagcgctgccagccagcctgtttcccgagtcc
gtcgcttacgtcgctcttggccatttgcacaagccgcagcaggtcgccgggcaggcgcgc
atccgctacagcggctcgccgctgccgctgtccttcgccgaggtcaattacccgcatcag
gtgctgctggtcgaactggacggcgaccaattgaaaaacgtcgaacagctgccggtgccg
cgcgcggtggagatgatccgtatcggtcgcgcgtcgctggccgaggtgatcgccgcgctg
gaggcgctgccgcccaccggcctgttcgacgaccacctgccctggctggaggtacgcgtg
ctgctcgacgagccactgccggacctgcgccagcgcatcgaaaccacgataaccggcaag
gcctgccgactggtgcggatcgccagcgaatacgccggcaaacgcggcgaggcggaatcg
gaagtattgctcggcctggatcagatcaccccgcaggagctgttcgcccgggcctgggaa
gccgaatacggcaacccggcggacgatcaggcgctggacgacttcgccacgcttctgcaa
cgggtcgagttcgcccatgcggagggcgaccaatga
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