Stutzerimonas decontaminans: UIB01_20200
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Entry
UIB01_20200 CDS
T03366
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pstu
Stutzerimonas decontaminans
Pathway
pstu00300
Lysine biosynthesis
pstu00470
D-Amino acid metabolism
pstu01100
Metabolic pathways
pstu01110
Biosynthesis of secondary metabolites
pstu01120
Microbial metabolism in diverse environments
pstu01230
Biosynthesis of amino acids
Module
pstu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pstu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
UIB01_20200
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
UIB01_20200
Enzymes [BR:
pstu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
UIB01_20200
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF3863
Motif
Other DBs
NCBI-ProteinID:
AHY44672
UniProt:
A0A023WWT9
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All DBs
Position
4254238..4255668
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AA seq
476 aa
AA seq
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MSQNYSQPMISGELGSNNPNAAVDRNYYARGMHVPALFEIDGNPIPALVAEFGSPLFVFS
EHTLRNKARHAREAFKRRYPKTSFAWSFKTNSLNSICCILRQEGWIAEVVSDFEYEKARA
LGFAGSEIVFNGPYKPRHILERAIEEGALLHIDNWDELNLIEELTKGRKQPLDVGIRVWL
DAGIRPVWSKFGFALANGEAERAAARIVKNPGLRLHTLHTHIGTYILAPEAYRNATQKLL
ALRDAIHEHHHHLVECLDLGGGFPSNSLLHGMAGPAEQVVPPIEAYADAITEVLNRLPEK
KRPLLRLESGRHIVDEAGYLLTSIVAVKGMHRSRVEAESLSARDYKEQLILGEDPKVSYI
ADAGINLLYTAAWYRFDVRPSRLIAAAPVPSRIYGSLCMAIDVIREQVDLPPLEIGDVLS
VHPVGAYNVGQSMQFIAYRPAIVLIDENGMPELIKPAESLDDVQRLERLPARLAVT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtgagccagaattactcccaacccatgatcagtggcgagcttggcagcaataacccaaac
gctgcagtggaccgcaattactatgcacggggcatgcacgttcctgcactcttcgagatc
gacggcaaccccattccggccctggtcgcagagttcggttcacccttgttcgtattttcc
gaacacacgctgcgcaacaaggcccgtcatgcccgcgaagcgttcaagcggcgctatccg
aaaaccagcttcgcctggtcgttcaagaccaacagcctcaacagcatctgctgcatcctg
cgtcaggagggctggattgccgaagtggtttcggacttcgagtatgaaaaggctcgagcg
ctgggctttgcgggctcggagatcgtcttcaacggtccctacaagccgcgccacatactc
gagcgcgcgattgaggaaggcgcgctgctgcacatcgacaactgggacgagctcaacctg
atcgaggagctgacgaagggccgcaaacagccgctggatgtcggcatcagggtttggctg
gatgcgggcatccgacctgtgtggtccaagttcggcttcgccttggccaatggcgaggcc
gaacgagccgccgcgcgcatcgtgaagaatcccgggctgcggctgcacactctgcatacg
catatcggtacctacatcctggcaccggaagcctaccgcaacgctacgcaaaagctgctg
gcgctgcgcgacgccatccatgaacaccatcatcacctggtcgagtgtctggacctcggc
ggcggtttcccttccaacagtctgctgcatggcatggccggaccggccgaacaggtggtg
ccgccgatcgaggcctacgctgatgccatcaccgaagtgttgaacagactgccggagaaa
aaacgacctctgctgcgtctggagtccggccgccacatcgtcgacgaggcaggctatctg
ctgaccagcatcgtggcggtcaagggtatgcatcgctcccgcgtcgaggcggaaagcctc
tccgcacgggactacaaagagcagctgatcctcggcgaagacccgaaggtcagttacatc
gccgacgccggcatcaacctgctctataccgcagcctggtaccgcttcgatgtccgccca
tctcgcctgatcgcggctgcgcccgtgccgtcgcgcatctacggctcgctgtgcatggcc
atcgacgtcatccgcgaacaggtggacctgccgccgctcgaaatcggcgatgtgctcagt
gttcatccggtcggcgcctacaacgtcggccagtcgatgcagttcatcgcctatcggccg
gcgatcgtactgatcgacgagaacggcatgcctgagctgatcaaacctgccgaatcgctc
gacgatgtacagcgcctggagcgcctgcccgcaagactggcggttacgtga
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integrated database retrieval system