Stutzerimonas decontaminans: UIB01_22050
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Entry
UIB01_22050 CDS
T03366
Name
(GenBank) RNA polymerase sigma factor FecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pstu
Stutzerimonas decontaminans
Pathway
pstu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pstu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UIB01_22050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstu03021
]
UIB01_22050
Transcription machinery [BR:
pstu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UIB01_22050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_28
HTH_23
Sigma70_ECF
GerE
HTH_11
PhyR_sigma-like
HTH_Tnp_ISL3
HTH_VMAP-M9
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AHY45020
LinkDB
All DBs
Position
complement(4689133..4689648)
Genome browser
AA seq
171 aa
AA seq
DB search
MATEGMVRQQMLHRLYSDHHGWLNGWLRRQLGCNQRAADLAQDTFVRVMTKDGDMGAIRE
PRAYLHTIAKGLLINHWRRRQIEQAYLDALALQPELVAPSPESQALIVETLLQIDAMLAQ
LPAKVRRAFLMSQLQGMTYAAIAAELGVSERMVKKYMAQAMLHCLLLVAED
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgaaggtatggttcggcagcagatgctgcatcggctctatagcgatcatcac
ggctggctgaacggctggctgcggcgccagctgggctgcaatcagcgggctgccgatctt
gcgcaggatacgttcgtgcgggtgatgactaaggacggggacatgggcgccatccgcgaa
cccagagcgtatctgcataccatcgccaaaggcctgttgatcaaccactggcgccgccgg
cagatcgagcaggcctatctcgatgcgttggcgctgcaacccgagcttgtggcgccctcg
ccggaatcgcaggcgctgatcgtcgaaaccctgctgcagatcgacgccatgctggcccag
ctgccagccaaggtgcgcagggcatttctcatgtcgcaactgcagggcatgacctatgcg
gccatcgctgccgaactcggcgtttccgaacgcatggtgaagaagtacatggcccaggcg
atgctgcattgcctgttgctggtggcggaggactga
DBGET
integrated database retrieval system
