Pantoea stewartii subsp. stewartii: DSJ_00165
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Entry
DSJ_00165 CDS
T04970
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
pstw
Pantoea stewartii subsp. stewartii
Pathway
pstw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DSJ_00165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstw03021
]
DSJ_00165
03400 DNA repair and recombination proteins [BR:
pstw03400
]
DSJ_00165
Enzymes [BR:
pstw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DSJ_00165
Transcription machinery [BR:
pstw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DSJ_00165
DNA repair and recombination proteins [BR:
pstw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DSJ_00165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
AmiR_N
Motif
Other DBs
NCBI-ProteinID:
ARF47946
LinkDB
All DBs
Position
33921..34196
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKVGNRFDLVLVAARRARQMQVGGKDPLVPEENDKPTVIALREIEEGLVT
NQILDVRDRQEQQEQEAAELQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaaccgttcaggacgcagtagaaaaagttggtaatcgttttgacctggtg
ttggtcgctgcacgtcgtgcacgtcagatgcaggtaggcggcaaagatccgctggttccg
gaagagaacgataaaccgaccgttatcgcattgcgcgaaatcgaagaaggtctggtcacc
aatcagattttagatgtgcgtgatcgtcaggagcagcaagagcaggaagccgctgagtta
caggccgttaccgctatcgctgaaggtcgtcgttaa
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