Pantoea stewartii subsp. stewartii: DSJ_02445
Help
Entry
DSJ_02445 CDS
T04970
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pstw
Pantoea stewartii subsp. stewartii
Pathway
pstw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSJ_02445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstw03400
]
DSJ_02445
Enzymes [BR:
pstw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DSJ_02445
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DSJ_02445
DNA repair and recombination proteins [BR:
pstw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSJ_02445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
C1_2
Motif
Other DBs
NCBI-ProteinID:
ARF48337
UniProt:
H3RIC4
LinkDB
All DBs
Position
492600..493409
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGQTILHAVVRNARLRWPVSNEILALSDQPVLSVQRRAKYLL
LELPHGWIIIHLGMSGSLRVLPEELPAAKHDHVDLVMSNGKVLRYTDPRRFGAWLWSSDL
DGSSVLAHLGPEPLSEMFSGDYLFEKSRGKRTVIKQWLMDNKVVVGVGNIYASESLFTAG
ILPDRAAMSLSHDEAAFLANTIKAVLLRSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GEPCRACGTPIVSGKHGQRSTYWCPNCQH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttgccagaggtagaaaccagccgacgcggcattgagccacatctggttggt
caaacaattcttcacgccgtcgttcgcaacgcacgcttgcgttggccggtatccaatgaa
atcctcgcattaagcgatcagccagtactgagtgttcagcggcgcgctaaataccttttg
cttgagctgccacacggctggatcattatccatcttggtatgtctggcagtctgcgcgtt
ctgcccgaagaattgcctgccgccaaacacgatcatgttgacctggtgatgagcaacggg
aaggtcctgcgctacaccgatccccgacgttttggtgcctggttgtggagcagcgatctg
gacggaagcagcgtgctggcccatttaggtccagaaccactgagtgaaatgttcagtggc
gactatttgtttgaaaaatcccgcggtaagcgaacggtgatcaagcagtggttgatggac
aataaagtcgtggtgggcgtgggcaatatttatgcgagcgagtcactgtttacagcaggg
atcctgcctgatcgagcagcgatgagcctgtctcacgatgaagcggcgtttttggctaac
actattaaagcggtactgctccgttctatcgagcagggtggaacgacattgcgcgacttt
ttacaaagcgatggcaagccaggctattttgctcaggagttgcaggtttacggccgggct
ggcgaaccctgcagggcgtgtggcacgccgattgtaagtgggaagcacgggcagcgcagt
acctactggtgccccaactgccagcattaa
DBGET
integrated database retrieval system
