Pantoea stewartii subsp. stewartii: DSJ_04080
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Entry
DSJ_04080 CDS
T04970
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pstw
Pantoea stewartii subsp. stewartii
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pstw03016
]
DSJ_04080
Enzymes [BR:
pstw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DSJ_04080
Transfer RNA biogenesis [BR:
pstw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DSJ_04080
Prokaryotic type
DSJ_04080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ARF48610
UniProt:
H3RJR8
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All DBs
Position
835247..836191
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGMSSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGERTDTSDADGNRVQTRPVTFTQADLDTALDSFRGDIM
QVPSMFSALKHQGRKLYEYAREGITIEREPRPITVYDLQFIRWQGSELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIMLRRLQVARYPFERMVTLEQLQALQAEANASGDDLALQLDPL
LLPMDSPAADFPAVNLSADVAAYFKQGQPVHASQAPDQGLVRVTEGETRKFIGMAEVADD
GRIAPRRLVVEYQN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacgtccatggcgttttgttgctggataagcca
caaggcatgtcgtctaacgatgttctgcagaaggtgaaacgcatttttaacgctaaccgt
gcaggacacaccggtgcacttgatccgctggcaaccggcatgttgccgatctgtctgggt
gaagccaccaagttctcgcagtatctgctggattccgataagcgttatcgcgtgattgcc
cggttaggtgaacgtaccgatacctccgatgcggacgggaaccgggtacaaacccgtccc
gtgacctttacccaggccgatctggataccgcactggacagttttcgtggtgacattatg
caggtgccgtcgatgttttcagcattgaaacatcagggccggaaactgtatgaatatgcc
cgcgaaggcatcactatcgaacgtgagccccggccgatcaccgtgtatgacttgcagttt
attcgctggcagggcagtgagcttgagctggaaattcactgctctaaaggtacgtacatc
cgtaccattattgacgatttgggtgaaaagctgggctgcggtgcgcatgtcatcatgctg
cgtcgtttgcaggtagcacgctatcccttcgaaagaatggtcacgctggagcagcttcag
gcgttgcaggcagaggcgaacgcctcaggcgacgatctggcgttacagctcgatcctctg
ctgctgcccatggacagtccggctgcggattttcctgcggtcaacctgtcagcggatgtg
gcggcctactttaaacagggccagccggtgcatgcaagtcaggcacctgaccaggggctg
gttcgcgtcaccgaaggtgaaacacgcaagtttatcggtatggcagaagtggccgacgat
ggccggattgctccacgccgtttagtggttgagtatcagaattaa
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