Pantoea stewartii subsp. stewartii: DSJ_04280
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Entry
DSJ_04280 CDS
T04970
Name
(GenBank) peptidase M20
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pstw
Pantoea stewartii subsp. stewartii
Pathway
pstw00300
Lysine biosynthesis
pstw01100
Metabolic pathways
pstw01120
Microbial metabolism in diverse environments
pstw01230
Biosynthesis of amino acids
Module
pstw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DSJ_04280
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pstw01002
]
DSJ_04280
Enzymes [BR:
pstw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
DSJ_04280
Peptidases and inhibitors [BR:
pstw01002
]
Metallo peptidases
Family M20
DSJ_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ARF51828
LinkDB
All DBs
Position
complement(879638..880747)
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AA seq
369 aa
AA seq
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MSESQTLAQQLLRFDTINPPGNEAACMHFLADWLAERGFDVTLSTFGENRLNLMASLPGR
QPGPQLGFTGHLDTVPLGNADWQHDPFGEIVGDKLYGRGSSDMKAAVAAFAVACVTHQQA
IRQGSGVVMLITGGEETGCDGARALIDSVDLPEVGALIVGEPTANYPVIGHKGALWLRCE
TRGKTAHGAMPELGINAIYLAADALGKIQHFSPGAPHPLMKQPTLNVGRIVGGLNINSVP
DHTQFDVDIRSAPNLQHATIRQQLTTLLGDSVTVTTLVDLPAVLSEDNQAWIQSVYQHCQ
PLHNAPLTPRIVPYFTDASLLLPALGNPPCIILGPGEPSMAHQTDEHCLLSRLAEAEVLY
GALIHDWMT
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagagccagacactggcgcagcagctgttgcgctttgacaccattaatccgccg
ggcaacgaagcagcctgcatgcactttctggcggactggctggcggaacggggctttgac
gtcaccctgtccaccttcggcgaaaaccgcctgaacctgatggccagcctgcctggccgg
cagcccggaccgcagctgggatttaccggccatctggatacggttccgctcggcaatgcc
gactggcagcacgacccgttcggtgaaatcgtcggggataaactgtatgggcgcggttcg
agtgatatgaaggccgccgttgcagcctttgccgtcgcctgcgttacgcaccagcaggcg
attcgacagggttccggcgtggtgatgttgattaccggcggcgaagaaacaggctgcgat
ggtgcgcgggcgctgatcgacagcgttgacctgcccgaagtgggcgcgttgatcgtcggc
gagcccaccgccaactatccggttatcggccacaaaggcgcactctggctgcgctgtgaa
acccggggcaaaacggcccacggcgcgatgccggagctgggtatcaatgccatttatctg
gcggcggacgcgctgggcaaaattcagcatttctcacccggcgcgccgcatccgctgatg
aagcagccgaccctcaacgtcggccgcatcgtgggcggcctgaacattaactccgtgccc
gatcacacgcagtttgacgtggatatccgcagcgcccccaatctgcagcacgccaccatt
cgtcagcagctcacaacgttactgggcgacagcgtaacggtgaccacgctggtggatctg
cccgcggtgctgagcgaagacaatcaggcctggattcagtcggtttatcagcactgccag
ccgttacataatgccccgctgacaccgcgcattgtgccctacttcaccgatgcgtccttg
ctgctgcccgcgctgggcaatccgccctgtattatcctcggccccggcgagccgtcgatg
gcgcaccagaccgatgaacactgtctgctgagccggttagcggaagcggaggtgctgtat
ggtgcgttgattcacgactggatgacgtga
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