Pantoea stewartii subsp. stewartii: DSJ_05115
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Entry
DSJ_05115 CDS
T04970
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pstw
Pantoea stewartii subsp. stewartii
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pstw03009
]
DSJ_05115 (rumA)
Enzymes [BR:
pstw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DSJ_05115 (rumA)
Ribosome biogenesis [BR:
pstw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DSJ_05115 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
PCMT
RrnaAD
Methyltransf_25
MTS
TRM5-TYW2_MTfase
Methyltransf_23
Cons_hypoth95
Methyltransf_4
DOT1
PDGF
Ribosomal_L22
Methyltransf_15
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
ARF48785
UniProt:
H3RGW6
LinkDB
All DBs
Position
1051604..1052923
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AA seq
439 aa
AA seq
DB search
MAQFYSAKQRVTTRKRLTVTIEDLDPFGQGVARHKGKTLFVAGALPGEQAEVTLLEEKRQ
YARAKTERLLNHSPSRVEPRCPHFSRCGGCQQQHVDEPLQQQSKARALARMLTQAAKQPI
TVDEIIAGPAWGYRRRARLGLQWHSKTQQLQMGFRQEATNDLVDIQQCPVLVPQLEALII
PLRNCLTTLNAVNRLGHVELVLADNGPVMLLRHLDALTADDMAKLERFSHQHQLMLFLDD
GGEALRAISEQRPFYHSHQLTLTFSPQDFIQVNDTVNQQMVARAIARLDLQPDDRVLDLF
CGMGNFTLPVGKTVQNAVGVEGVAALVQQAEYNAEVNDLKNVRFFQHNLEDDVSRQPWAT
QGFNKVLLDPARAGAAGVMSHVVKLSPQRVVYVSCNPVTLARDSETLLSAGYQLERVAML
DMFPHTRHLESMVLFRKKT
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattttattccgcaaaacagcgcgtgacgacccgaaaaaggctgaccgtcact
atcgaagacctggatcctttcggtcagggcgtggcccggcacaaaggaaaaaccctgttt
gtcgcgggtgcgctgcccggcgaacaggcggaagtcaccctgctggaggagaagcgccag
tatgctcgcgccaaaacagagcgtctgttgaaccacagcccgtcacgggttgaacctcgc
tgtccgcattttagccgctgtggcggctgccaacagcaacatgttgatgagccgctacag
cagcagagtaaagcgcgtgcgctggcacgaatgcttactcaggcagcaaagcagccgatc
acggtggatgagatcatcgccggtcctgcctggggctatcgccgccgtgcccgccttggc
ctgcagtggcacagcaaaacacagcagctccagatgggctttcgccaggaagccaccaac
gatctggtcgatatccagcagtgccccgttttggtgccccaacttgaggcgctgattatt
ccgctgcgcaattgtctcactacgcttaatgctgtcaaccgtttaggccatgtcgaactg
gtgctggctgataacgggccggtgatgttattgcgtcatctggatgcattaactgctgac
gatatggcaaaactggaacggttttcgcatcagcatcagctcatgctgtttttggatgat
ggcggcgaggcactgcgcgcaatcagtgaacaacgcccgttttatcattcacaccagctt
acgctaaccttcagtccacaggattttattcaggttaatgatacggtgaatcagcagatg
gtcgccagggcaatcgcgaggctggatttacagcctgacgatcgtgtgctggacctgttt
tgcggcatgggaaactttacgctccctgtaggaaaaacggtacaaaatgccgtaggtgtg
gagggcgttgcagcattagtccagcaggcagagtataatgctgaggtcaatgatcttaaa
aacgtcagattttttcagcacaatctggaagacgatgtttcgcgtcagccctgggcgacg
caaggctttaataaggtgttactcgatccggcgcgggccggggcggcgggtgtcatgtcc
catgtcgtcaaactatcaccacagcgtgtggtctatgtgtcgtgtaatcctgtaacactc
gcgcgtgacagcgaaacactgttgtcggcgggctaccaattggaaagggtcgcgatgctg
gatatgtttccgcatacccgtcatctcgaatccatggtgctgttcagaaaaaaaacataa
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