Pantoea stewartii subsp. stewartii: DSJ_06235
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Entry
DSJ_06235 CDS
T04970
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pstw
Pantoea stewartii subsp. stewartii
Pathway
pstw00470
D-Amino acid metabolism
pstw00550
Peptidoglycan biosynthesis
pstw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DSJ_06235 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DSJ_06235 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pstw01011
]
DSJ_06235 (murD)
Enzymes [BR:
pstw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DSJ_06235 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pstw01011
]
Precursor biosynthesis
Amino acid ligase
DSJ_06235 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ARF48978
UniProt:
H3R8J1
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All DBs
Position
1287487..1288803
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AA seq
438 aa
AA seq
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MADYRGRKVVIIGLGLTGLSCVDFFIAQGVTPRVMDTRVSPPGLDKLPEQVERYVGGLNR
DWLLAADLIVASPGIALAHPALCEAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVT
TLVGEMAKAAGWQVGVGGNIGLPALSLLKAPAQLYVLELSSFQLETTYSLKAAAATILNV
TEDHMDRYPLGMQQYRAAKLRIYENAQVCVVNADDGMTMPVRGADARCVSFGIDIGDYHL
NKQQGSVWLRAKGEKVLNTDEMTLVGQHNYTNALAALALADAVGLPRSTSLSALAAYSGL
AHRFQLVHESRGVRWINDSKATNVGSTEAALKGLQVDGTLWLLLGGDGKSADFSPLQPYL
QGDRIRLFCFGRDGDALAALRPDVAVRTETLQEAMAQIAKQVQPGDMVLLSPACASLDQF
RNFEQRGDVFAQLARELS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggctgattaccgcgggagaaaagtcgtcatcatcggattaggcctgaccggcctgtcc
tgtgttgatttctttatagcgcagggcgtaacgccccgcgtgatggatacccgtgtatca
ccgcccgggctggataaactgcctgagcaggtggaacgttatgtgggcggtctcaatcgc
gactggctgctggctgcggatctcatcgtggccagccccggcattgccctggcccatccc
gcattgtgtgaagcggcagacgcgggcattgaaatcgtcggcgacattgagctgttttgc
cgggaagcacaggcaccgatcgtggcgatcaccggttcaaacggaaagagtacggtcact
acgttagtcggcgaaatggcgaaagccgccggttggcaggtaggcgtcggcggtaatatt
gggttgcccgcgctgagcctgctgaaagcgcccgctcagctctatgttctggagctttcc
agcttccagttagaaaccacctacagcctgaaggccgcagcggccacgatcctgaacgtg
accgaagatcatatggatcgctatccgttaggtatgcagcagtatcgcgcggcaaaactg
cggatttacgagaacgctcaggtttgcgtggtgaatgccgacgatggcatgaccatgccg
gtacgcggcgccgacgcacgctgtgtcagtttcggtatcgatatcggcgattatcacctg
aacaaacagcagggcagtgtttggctgcgggcgaaaggcgaaaaagtcctgaacacagac
gagatgacgctggtcggacagcataactacaccaatgcgctcgccgcgttggcgctggcc
gatgcggttggtctgccacgctcgaccagtctgtccgcactggcggcttattcaggtctg
gcgcaccgtttccagctggttcatgaaagccgcggtgtgcgctggatcaatgattcaaaa
gcaaccaatgtgggcagtacggaagcggctctgaagggattacaggttgacggtacgctc
tggttactgctgggaggcgatggcaaatctgcggatttctctccactgcaaccgtatctg
cagggcgatcgtatccggctgttttgctttgggcgcgatggtgatgcactggccgcgctc
cgccctgacgtggcggtcaggaccgaaacgctgcaggaggcaatggcgcagattgcaaaa
caggtacagccaggcgacatggtcctgctttccccggcctgcgccagccttgaccagttc
cgcaattttgaacagcgcggcgatgtcttcgcgcaactggccagggagttaagctga
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