Pantoea stewartii subsp. stewartii: DSJ_09555
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Entry
DSJ_09555 CDS
T04970
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pstw
Pantoea stewartii subsp. stewartii
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pstw03032
]
DSJ_09555
03036 Chromosome and associated proteins [BR:
pstw03036
]
DSJ_09555
03400 DNA repair and recombination proteins [BR:
pstw03400
]
DSJ_09555
DNA replication proteins [BR:
pstw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DSJ_09555
Chromosome and associated proteins [BR:
pstw03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DSJ_09555
DNA repair and recombination proteins [BR:
pstw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DSJ_09555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
ARF49560
UniProt:
H3RBB0
LinkDB
All DBs
Position
1964045..1964329
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AA seq
94 aa
AA seq
DB search
MTKSELIERLAGQHTHIPAKVVEDAVKEMLEHMATTLAQGERIEIRGFGSFSLHYRAPRT
GRNPKTGDKVDLEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaattgattgaaaggctggcgggacagcatactcatataccggcgaaa
gtcgttgaggatgcagtcaaagagatgcttgagcacatggccacaacgctggcacagggc
gaacgcattgaaatccggggattcggcagcttttcgttgcactatcgcgcaccgcgcact
ggccgtaacccgaaaacgggtgacaaagtggatctggaaggtaaatacgttccccacttc
aagccgggcaaagaactgcgtgaccgtgctaacatctacggctaa
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