Pantoea stewartii subsp. stewartii: DSJ_14760
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Entry
DSJ_14760 CDS
T04970
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pstw
Pantoea stewartii subsp. stewartii
Pathway
pstw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSJ_14760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstw03400
]
DSJ_14760
Enzymes [BR:
pstw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DSJ_14760
DNA repair and recombination proteins [BR:
pstw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DSJ_14760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ARF50472
UniProt:
H3RDC2
LinkDB
All DBs
Position
2979829..2980635
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AA seq
268 aa
AA seq
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MKFISFNINGLRARPHQLEALVEKHQPDVIGLQETKVHDDMFPLEDVAKLGYNVFYHGQK
GHYGVALLTKVQPVSVRRGFPGDGEDAQRRLIMAEIPSPIGDITLINGYFPQGESRDHPT
KFPAKEKFYRDLQSYLSESLTADKPVLIMGDMNISSTDLDIGIGEDSRKRWLRTGKCSFL
PEEREWMDRLLSWGLVDTWRAHNPDTCDRFSWFDYRSKGFDDNRGLRIDLLLASTGLASH
CIESGIDYDIRGMEKPSDHAPVWSTFRF
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatttcattcaatattaacggcttgcgggcacgtccccatcaactcgaagca
ctggtcgagaagcatcagcctgacgtcattggtctgcaggaaacgaaagtccatgatgat
atgttcccgctcgaggatgtggctaagctgggctacaacgtgttttatcacggtcagaaa
ggccattacggtgtggcactgttgaccaaggttcagccggtctccgtgcgtcgggggttt
ccgggcgatggcgaggatgcgcagcgtcgcctgatcatggctgaaatccccagcccgatt
ggcgatattaccttgataaatggctattttccgcagggcgagagccgagaccacccgaca
aagtttccggccaaagaaaaattttaccgcgatctgcaaagctatctgagcgagagtctt
acggcggataagcccgtgctgatcatgggcgatatgaatatcagcagcaccgacctggat
attgggattggcgaagacagccgtaaacgctggctgcgtaccggtaagtgttctttcctg
cccgaagagcgggaatggatggacaggctgttaagctgggggttggtcgatacctggcgt
gcgcataatcccgatacctgtgaccgtttttcctggttcgattaccgttctaaagggttc
gatgacaatcgcggtctgcgcattgacctgctgctggccagcaccgggctggcctcgcac
tgcattgagagcggtatcgactacgatattcgtggcatggaaaaaccctctgaccatgcc
ccggtctggtcaaccttccgcttctga
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