Pantoea stewartii subsp. stewartii: DSJ_15190
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Entry
DSJ_15190 CDS
T04970
Name
(GenBank) exodeoxyribonuclease X
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
pstw
Pantoea stewartii subsp. stewartii
Pathway
pstw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DSJ_15190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstw03400
]
DSJ_15190
DNA repair and recombination proteins [BR:
pstw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DSJ_15190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
ARF50550
UniProt:
H3RFP5
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All DBs
Position
3068020..3068688
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AA seq
222 aa
AA seq
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MLRVIDTETCGLQGGVVEVASVDVIDGQIVNPMSDLVSPDRPISRQAMAVHRITEAMVMG
KPPIEDAITRYHGSAYYVAHNASFDRRMLPEMAGDWICTMTLARQLWPGIKYGNQALRHS
LKLEVTPPADLHAHRALYDCYVTAALLIRIMDLSGWSAAEMSQRSQPAAQRDDVLPFGKY
RGQVLAVIARKDPGYLKWMLENVKDLRPPLRQALRKYLSQLP
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtgtcattgatacagaaacctgcgggctgcaaggcggcgttgtcgaagtggca
tccgtggatgtgattgacggccagatcgtcaatcctatgagcgatttggtttcacccgac
cgccctatcagccgccaggcgatggccgttcatcgcatcactgaagcgatggtgatgggt
aagccgccgattgaagatgccattacgcgctaccacggcagtgcatattatgtcgcgcac
aatgccagcttcgaccgccggatgttgcctgagatggccggcgactggatctgcaccatg
acgctggcacgccagctgtggccagggatcaaatacggtaatcaggcgctgcggcacagt
ctgaagctggaagtgacgccgcccgcagatttacatgctcaccgcgcactttacgactgc
tatgttacggcggccctgttgatccgcattatggacctgtctggctggagcgccgctgaa
atgagccagcgctctcagcctgccgcccagcgcgatgatgtactgccgtttggtaagtat
cgcggccaggtgctggccgtcattgcccgcaaagatccgggttatctgaaatggatgctt
gagaacgttaaagatttgcgcccgccattgcgacaggcgctgcgtaaatatctcagtcag
cttccctga
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