Pantoea stewartii subsp. stewartii: DSJ_19155
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Entry
DSJ_19155 CDS
T04970
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
pstw
Pantoea stewartii subsp. stewartii
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pstw03032
]
DSJ_19155
03036 Chromosome and associated proteins [BR:
pstw03036
]
DSJ_19155
03400 DNA repair and recombination proteins [BR:
pstw03400
]
DSJ_19155
DNA replication proteins [BR:
pstw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DSJ_19155
Chromosome and associated proteins [BR:
pstw03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DSJ_19155
DNA repair and recombination proteins [BR:
pstw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DSJ_19155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
UBA_HYPK
Motif
Other DBs
NCBI-ProteinID:
ARF51224
UniProt:
H3R9A9
LinkDB
All DBs
Position
complement(3849188..3849460)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAADADISKAAAGRVLDAFMGSVSDALKSGDEVALVGFGTFSVRERAARTG
RNPQTGKEITIPAGKVPGFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtcacaactgatcgataaaattgctgccgatgccgacatttctaaagcagca
gcaggacgtgttttagatgcatttatgggctctgtttctgacgcgctgaaaagcggagat
gaagtggcgctggtaggtttcggcactttctcagtacgtgagcgtgcagcgcgcaccggc
cgtaacccacaaaccggtaaagagattactatcccggcaggtaaagtaccgggtttccgt
gcaggtaaagcactgaaagacgctgtcaactaa
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