Pantoea stewartii subsp. stewartii: DSJ_20610
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Entry
DSJ_20610 CDS
T04970
Name
(GenBank) double-stranded uracil-DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
pstw
Pantoea stewartii subsp. stewartii
Pathway
pstw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSJ_20610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstw03400
]
DSJ_20610
Enzymes [BR:
pstw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
DSJ_20610
DNA repair and recombination proteins [BR:
pstw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSJ_20610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ARF51479
UniProt:
H3RA23
LinkDB
All DBs
Position
complement(4136098..4136613)
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AA seq
171 aa
AA seq
DB search
MSEHNITDIIAPDLNVLFCGINPGQSTAHTGYHFAHPGNRFWKVIHLAGFTVQQLKPEEE
QRLLETGCGITMLVERPTIQANELASDELRDGGQRLMDKVLCYQPAALAILGKDAFKRAF
RQSKVEWGEQPIYMGKTQVWVLPNPSGLNRASLEEMVALYRQMYEALQLRR
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacacaacatcaccgatatcattgcaccggacctgaacgtcctcttctgcggc
attaatcccggtcagtcgaccgcgcacaccggctatcattttgcccatcccggcaatcgc
ttctggaaggtgattcacctggcagggtttacggtgcagcaactgaagccggaagaggag
cagcgcttactggagaccggctgtggtattacaatgctggtcgagcgtccgaccattcag
gcaaatgaactggccagtgatgagctacgtgatggcggtcagcggctgatggacaaggtt
ctatgctatcagcctgccgcgctggctatcctgggcaaagatgcctttaaacgcgcgttt
cgtcagagcaaagtggaatggggcgagcagccgatctacatggggaaaacccaggtgtgg
gtgttgccgaatcccagcggattaaaccgggcctcactggaagagatggtggcgctatat
cgccagatgtacgaggcgttacagctgcggcgttaa
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