Pantoea stewartii subsp. stewartii: DSJ_22065
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Entry
DSJ_22065 CDS
T04970
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pstw
Pantoea stewartii subsp. stewartii
Pathway
pstw03420
Nucleotide excision repair
pstw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSJ_22065
03430 Mismatch repair
DSJ_22065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstw03400
]
DSJ_22065
Enzymes [BR:
pstw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSJ_22065
DNA repair and recombination proteins [BR:
pstw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSJ_22065
MMR (mismatch excision repair)
Other MMR factors
DSJ_22065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_11
PhoH
Motif
Other DBs
NCBI-ProteinID:
ARF51714
UniProt:
H3RIW5
LinkDB
All DBs
Position
complement(4427521..4429683)
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AA seq
720 aa
AA seq
DB search
MDVSELLDGLNDKQRAAIAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPARQGMWYINGKKDEGLRPKHIESYGNPVEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPPILNHYRERFSNILVDEFQDTNNIQYAWIRMLAGDS
SKVIIVGDDDQSIYGWRGAQVENIQRFLTDFPGADTIRLEQNYRSTNTILKAANALIANN
NGRLGKELWTDGSDGEPVSVYCAFNELDESRFVVNRIKAWMENGNALADCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAFERVVNTPTRGVGD
RTLDVVRQTAREQQITLWQATRELLQSRALAGRAASALQRFCELVDSLASETAEMPLHVQ
TDRVIKDSGLWLMYEQEKGEKGQARIENLEELVTATRQFSYQDEDEDLMPLQAFLSHAAL
EAGEGQADKWQDAVQLMTLHSAKGLEFSQVFIVGMEEGMFPSQMALDEGGRLEEERRLAY
VGVTRAMMKLTLTYAETRRLYGKEVYHRPSRFIGELPEDCIEEVRLRASVTRPVSHQRMG
TPISKSDTGFSLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgaactgctcgacgggttgaatgacaaacagcgtgctgccattgcggca
ccgcgcagcaacctgctggtgctggcgggcgcgggcagtggaaaaacacgcgttctggtg
caccgcatcgcctggctgctgtccgttgaaaactgttcaccttattccattatggcggtg
acctttaccaacaaggcggcggcagagatgcgtcaccgtattgagcacctgatcggcacc
agtcagggcggtatgtggattggcacgtttcacggccttgcgcaccgtctgctccgtgcg
catcatctcgacgcggggctgccgcaggacttccaaatcctcgacagtgaagatcaactg
cgcctgctcaaacgcctgattaaggcgatgaatctggatgagaagcagtggcctgcgcgt
cagggcatgtggtacatcaacggcaagaaagatgaaggtttacggccgaagcacattgaa
agctatggcaacccggtagaacagacctggctgcgcatttatcaggcctatcaggaagcc
tgcgatcgtgccgggctggtcgattttgccgagttgctgctgcgggcccatgaactgtgg
ttaaacaagccccctatcctgaatcactaccgtgagcgtttcagcaatattttggtggat
gaatttcaggatacgaacaacattcagtatgcctggattcgtatgctggcgggcgacagc
agcaaagtcattatcgtcggtgatgacgatcagtccatctatggctggcgcggggcgcag
gttgaaaatattcagcgcttcctgacggattttcccggtgccgataccattcgtcttgag
cagaattaccgctccaccaacacgattctgaaagccgctaacgccctgattgccaataat
aatggccgactcggcaaagagctgtggaccgatggcagcgatggcgagccggtctcggtt
tactgcgccttcaacgagctggatgagtcgcgctttgtcgtcaatcgcattaaagcctgg
atggaaaatggcaatgcgctggccgattgcgcgattctttaccgcagtaacgcccagtcg
cgcgtgctggaagaagccctgctgcaggccagtatgccctaccggatttacggcggcatg
cgcttcttcgagcgccaggaaattaaagatgcgctggcctatctgcgtctgatagccaac
cgcaacgacgatgcggctttcgagcgcgtggtcaatacgcccacacgtggcgtgggcgat
cgtacgctggatgtggtgcgtcagacggcccgcgaacagcagatcaccttatggcaggca
acgcgtgaactccttcagtcacgcgcgctcgccggccgtgccgcctctgccctgcaacgt
ttctgtgagctggtggattcactggcaagcgaaaccgccgaaatgccactgcacgtgcag
accgatcgggtcatcaaggattccggtctgtggctgatgtacgagcaggaaaagggtgaa
aagggccaggcgcgtatcgaaaaccttgaggagctggtgacagccacgcgccagtttagt
tatcaggatgaagatgaagacctgatgccgcttcaggccttcctgtcgcatgccgcgctg
gaagccggcgaagggcaggcggacaaatggcaggatgcggtacaactgatgacgctgcac
tctgcgaaagggctggagttcagtcaggtatttatcgtcggcatggaagaaggcatgttc
cccagccagatggccctggacgaaggcggacggctggaagaagagcgccgcctggcttac
gttggcgtcacacgtgccatgatgaaactgacgctgacgtacgcggaaacccgccgtctg
tacggaaaagaagtttaccatcgcccctcgcgattcatcggtgagctgcccgaagactgt
attgaagaagtccggttacgcgccagcgttacgcggccggtcagccatcagcgcatgggc
acaccgatcagcaaaagcgacacggggttctctctgggacagcgcgttcgtcacgcgaag
tttggtgaaggcaccatcgtgaatctggaaggtagcggggaacacagccgccttcaggtg
gcatttcaggggcaggggatcaagtggctggtggctgcctacgccaaactggaaaccgtc
tag
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