Pantoea stewartii subsp. stewartii: DSJ_22270
Help
Entry
DSJ_22270 CDS
T04970
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pstw
Pantoea stewartii subsp. stewartii
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
DSJ_22270
Enzymes [BR:
pstw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
DSJ_22270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
Motif
Other DBs
NCBI-ProteinID:
ARF51744
LinkDB
All DBs
Position
complement(4472001..4473977)
Genome browser
AA seq
658 aa
AA seq
DB search
MATVSLIATVTISIFIVIQLFHFVQQRRIDYAQQMENIAHTVRQPLSEAVLKADIPQAER
ILNSLKPAGILSRADVVLPNAFQALHANFENEKPVPRLIARIFELPVQITLPLYSVEHTG
LPKPLAYLVLQANSFRVYQFILSTFSTMIITYLLLALILSVSISWCINRLVVHPLRRISR
EIQELPPQAILTHKLSVPADHRDDEIGMLIRSYNRNQQVLESIHDQMSRLTTHFDVTDLP
NRALFLALLEQFIRARRHAFSVMVIRIETLQEANGVLSDEQRDTLMLTLAEKIRSTIDDQ
TLLAQTATSDFVLLMKSASNPFRAMRLARNLMIRLNQPVTLHQLQLRPNASIGLALSEED
ETTGANEMLDRATSAMMSARRQGKNQILFFDAALTERAQKRLTQEHDILQGLHDEQFALY
LQPQIDMRTGRLAGAEALLRMRQADGRYGLPEEFIASAEEIGVISAIGRWVFEEACRILA
GWQRHGVRVPLSINISAVQLRDVSIVNHLQSLLAHHSIAPGTLVLEITETAQMGDAEQAI
SLLRMLQKTGVAVALDDFGMGYSNLNYLHQFKALPVNKLKMDRSFVAALPEDDTMVRIVA
AIADIIDLDVIAEGVETSEQRDWLLARGITIGQGYLYSEAVPLAQFTHQWLDNALEEE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagtctcgctgattgcgacagtgaccatcagcatttttatcgttatccaactg
tttcattttgtgcaacagcgcagaatcgactacgcccagcagatggagaatatcgcgcat
accgtgcgtcagccgctgtctgaagcggtgctgaaagcggacatccctcaggctgaacgc
attcttaattcgttaaaacctgccgggattttgtcgcgtgctgatgtggtgctgccgaat
gcgttccaggcgctgcatgcgaacttcgaaaacgagaaacccgttcccagactgatcgcc
agaatctttgaactgccggtgcaaatcaccttaccgctttactctgttgagcataccggt
ttaccgaagccgctggcttatctggtactgcaggcgaattcatttcgtgtttaccagttt
attctgagcacgttctccacgatgatcatcacctatttgctgctggcactcatcctgtcc
gtttcaattagctggtgtataaaccggttggtggtgcatccgctgcgccgtatctcccgc
gaaatacaggaactgccaccgcaggcgattctgacccacaaactgtctgtgcctgccgat
caccgtgacgatgaaatcggtatgctgattcgcagctataaccgcaaccagcaggtgctt
gagtccattcatgatcagatgagtcggttaacaacgcatttcgacgtcaccgatctgccg
aatcgggcgctgtttttagctttactggaacagtttatccgcgctcgtcgccatgctttt
agtgtgatggtgatacgcatcgaaaccctgcaggaagcgaatggtgtactgagtgatgaa
cagcgcgatacgttgatgctgacgctggccgagaaaattcgcagcaccattgatgatcag
acattgctggcacagactgctaccagtgattttgtcttactgatgaaatcagccagcaac
ccctttcgcgcgatgcgactggcccgcaatctgatgattcgccttaatcagcctgtcact
ctgcatcagctacaactgcgacccaatgccagtatcggtctggcgttaagcgaagaagat
gaaacgacgggggctaatgagatgctggatcgtgcgacctccgcaatgatgtcagcccgt
cgtcagggcaaaaatcagatcctgttttttgatgccgccctcaccgaacgggcgcaaaag
cgcttaactcaggaacacgatatcttacagggcttgcacgacgagcagtttgccctctat
ttgcaaccccagattgatatgcgcaccggcaggctggcgggtgcggaggcactactgcgt
atgcgtcaggcggacggccggtacggattacccgaagagttcatcgccagcgcggaagaa
atcggggtgatttcagcgattggccgctgggtatttgaagaagcatgccgcattctggct
ggctggcagcgccatggggtgagggtcccgctgagtatcaatatttctgccgttcagtta
cgcgatgtcagcattgtgaatcatctgcaatccttgctggcgcaccattcaattgcgcca
ggcacattagtgctggagattaccgaaaccgcgcaaatgggcgatgctgagcaggctatt
tccctgctgcggatgttgcaaaaaaccggcgttgccgttgcactggatgactttgggatg
ggctattccaatcttaactacctgcatcagtttaaagccttaccggttaacaaactgaaa
atggatcgcagctttgttgccgcgttgcctgaggacgacacgatggtgcgtatcgtggcg
gccattgctgacattattgacctggatgtcattgctgaaggggtagaaaccagtgaacag
cgtgactggctgctggcccgcggtatcacgattggtcagggctatctttattctgaagcc
gtgccgctggcgcaatttactcatcaatggctggataatgccctggaggaggaataa
DBGET
integrated database retrieval system
