KEGG   Pantoea stewartii subsp. stewartii: DSJ_24705
Entry
DSJ_24705         CDS       T04970                                 
Name
(GenBank) VapC toxin family PIN domain ribonuclease
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
pstw  Pantoea stewartii subsp. stewartii
Brite
KEGG Orthology (KO) [BR:pstw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pstw03016]
    DSJ_24705
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pstw02048]
    DSJ_24705
Transfer RNA biogenesis [BR:pstw03016]
 Prokaryotic type
  tRNA degradation factors
   DSJ_24705
Prokaryotic defense system [BR:pstw02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    DSJ_24705
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: ARF52439
UniProt: H3RL77
LinkDB
Position
pDSJ09:96696..97094
AA seq 132 aa
MLKYMLDTNICIFTIKNKPEAVRQQFNLHRQQLCISTITLMELIYGAEKSSAPERNLAVV
EGFAARLTVLDYDMHAATHTGQIRAEQAKVGQPIGPYDQMIAGHARSRGLIMVTNNMREF
SRVSGLRAEDWV
NT seq 399 nt   +upstreamnt  +downstreamnt
atgctcaaatacatgctggacaccaatatctgcatcttcaccatcaaaaataaaccggag
gcggtcaggcaacagttcaacctgcaccgccagcagctttgcatcagcacaatcacgctg
atggagcttatttatggcgcagagaaaagcagcgcgccggaacgtaatctggctgttgtg
gaagggttcgcggcacgccttaccgtactggattacgatatgcatgctgccacccataca
gggcaaatccgggccgaacaggcgaaagtcggtcagcccattggtccgtatgaccagatg
attgccggacacgcccgcagccggggactgattatggtgaccaataatatgcgggaattc
tcccgcgtatccggccttcgcgcagaagactgggtctga

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