Pedobacter steynii: BFS30_00340
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Entry
BFS30_00340 CDS
T04469
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
psty
Pedobacter steynii
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psty02000
]
BFS30_00340
Transporters [BR:
psty02000
]
Other transporters
Pores ion channels [TC:
1
]
BFS30_00340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
AOM75754
UniProt:
A0A1D7QAW7
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All DBs
Position
86179..89382
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AA seq
1067 aa
AA seq
DB search
MNFKVLLRSIGMVMISCFLFANTGWSQSRVKVQGVVKSAAGETLPGASVTVKDTKQGAVT
NNKGEFSITAETGKLLLFNYLGFQPQAYVVKAAETVTITLQEIPNTMNEVVVIGYGTQKK
SAVTGAVSKLKNENLDEIPTSRLDNALIGKIAGVTIQNVSSESGAEPIVRVRGFSSISAG
SQPLVVVDGYPVPDGLSFVNPQDVESIEVLKDAASAAIYGSRAANGVILITTKSGNSDKP
RYSIKSYYGFKKPYELNPIMSITDYTKMLFAEAALRENDPTVPANAKNLITGPERAAYII
EDQISGIPTDWQQEALQSAGIKNIQLGISGGKKDLRYYISASGQKDEAVLKYSDNSRINV
KAKVDGALSKKIDFSINFNPSYIKTQRPAVNFTDYFRFGSFLPVNHNEFTAAYVRQNSQW
ANILPGDFVQARHFNGLQYSGTMPDGSIWTSTGPVEPFATSNNTPVSIAARENRDQQTYR
MLGAGDVSIKFLPNLIFKSSIGGYYSQQENNTFTKSSARKDGDVNEATIYTKTYLDLLLE
NTLNYNLSKGNHSFSGLLGFTTQQTQIKESNMVGRNFPTENFETLNQAAQIDQALTNTLK
DRIGLISYLGRFTYDYKNKYLLALSYRMDGSSYFAEGQKYGSFPAVSAGWGIGKEDFMKN
VSWISNMKVRASYGATGNNKIQSFAFQNLLYPGNYSFGSGTGSVNLGLAPNSDVLANPNI
TWERTFEFNAGLDLGFMKDRFGLTLEYYNSNTDKLLYKRSTQSFSGSFEYFDNSGRIKNQ
GIEIELSSHNIKNDHFQWSTSLNFSANRNKLLELGGEPFQYNYGERNEIYAAIVGQPAIQ
FFGYKTNGVWTSQAQIDEAKAGGQSSTLAKYYAPGGLKFVDVNGDNKIDVNDRTSLGSPF
PDFTWGINNSFKYKGFDLNILIQGVQGVKLINGDANYNESRRYNENFNKNRWISAANPGD
GKTPYYTNGENWLLTDYVIEDGSYAAIRNVILGYTIPSRFTKKLGVTGIRLYSSADNLLY
LMGKSYRGINPEARATSSQYSSPLIDGYQRGAFPISRTYTFGIDVNF
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaagttttgttacgaagcatagggatggtgatgatctcctgtttcctgttt
gcaaatacaggctggtcgcaaagcagggtaaaagtgcagggtgtggtaaaatccgcagcc
ggcgaaactttaccaggtgcatctgtaacggtaaaagacaccaaacaaggcgcagtgacc
aataacaaaggagagtttagcatcactgcagagactggaaaactactgctcttcaattac
ctcggttttcagcctcaggcttatgttgtgaaagctgccgagaccgttaccatcaccctt
caggaaatcccgaatacgatgaacgaagtggtggtgatcggctatggtacccagaagaaa
tccgcagtaacaggtgccgtgagcaagttaaaaaatgagaacctggacgagattcctacc
tcgcgcctggataatgcattgatcggaaaaattgccggggtaaccattcagaatgtcagt
tctgaatccggtgcagaacccattgtgagggtgcgtggatttagttcgatcagcgccgga
tcccagccgctggttgtggtagatggttaccccgttcccgatggtttatcttttgtaaac
cctcaggatgtggaatctatagaggtacttaaagatgcggcctccgcagcaatttatggc
tcaagagctgcaaacggggtgatcctgatcaccacaaaaagcggcaattcggacaaacca
aggtacagcatcaaatcttattatggtttcaaaaaaccttatgagcttaacccgatcatg
agcattaccgactatacaaaaatgctctttgcagaagcggccttaagggaaaatgatcct
accgttcctgccaatgcaaaaaacctgattaccggaccagaaagggcggcttatatcatc
gaagaccagatcagcggcatacccaccgactggcagcaggaagctttgcaaagtgcaggc
attaaaaacatacagctcggcatttccggaggtaaaaaagacctgcggtattacatttct
gccagcggacaaaaagatgaagcagtgctgaaatacagcgacaacagcaggatcaatgtt
aaggcgaaagtggatggtgcattgagcaagaaaatagatttcagtatcaattttaacccc
tcttatattaaaacacaaagaccggccgtaaatttcacggattatttcagatttgggtct
ttccttccggtaaatcacaatgaatttaccgctgcctatgtacgtcaaaactcacaatgg
gccaatatccttcccggtgattttgtacaggcaagacattttaacggattgcaatattcc
gggaccatgcccgatggcagcatctggacaagcaccggcccggtggaaccttttgccacg
agcaacaataccccggtatcaattgctgcaagggaaaaccgagatcagcagacttaccgg
atgctgggtgctggggatgtcagcattaaattcctgccgaacctgatctttaagagttcc
atcggtggatattattcccagcaggagaacaatactttcacaaaatcaagtgccagaaaa
gatggagatgttaatgaagcgaccatctataccaaaacctatcttgacctcttattggaa
aacacgctgaactataacctcagtaagggcaaccacagtttcagcggtttactgggtttc
accactcagcaaacacagatcaaagaatccaatatggtaggaaggaatttccctactgaa
aattttgagaccttaaatcaggctgctcagattgaccaggctttaaccaatacgctcaaa
gaccgcatcggcctgatctcttatctcggtcgttttacttatgattacaaaaacaagtat
ctgctggcattgagctacagaatggatggtagctcctattttgctgaaggacaaaaatat
ggttcttttcccgcggtgtctgccggatggggaatcggaaaagaggacttcatgaaaaat
gtttcctggatcagcaatatgaaagtcagggcaagttatggagctaccggaaacaataaa
attcagagttttgccttccagaacctgttatatccgggcaattattcttttggcagcggc
acaggatccgtaaacctcggcctggcgcccaactccgatgtactggccaatccaaacatc
acctgggaacgtacttttgaatttaatgcgggattggacctgggttttatgaaagaccgt
ttcggacttaccctggaatactacaactcaaatacggataaactgttatataaacgttct
acacaatctttcagtggatcttttgaatactttgacaattcgggaaggatcaaaaatcaa
ggtatagagatagaacttagctcccacaacatcaaaaatgatcattttcaatggtctact
tccctgaatttctctgccaacaggaacaaattgctggagcttggcggggagccttttcaa
tataactatggagaacggaatgaaatctatgcggctattgtggggcaaccggccattcag
ttttttggttataaaaccaatggagtctggacatcacaagctcagattgatgaggcaaaa
gcaggcggacagagctctaccctggcaaaatattatgcgccaggaggtttaaaatttgta
gatgttaatggcgacaataagattgatgttaacgaccgtacctcattgggaagtcctttt
cctgacttcacctggggcatcaacaattcatttaagtacaaaggttttgacctgaacatt
ctgattcagggcgtgcagggggtaaagctgatcaatggcgatgccaactataacgaatcc
aggaggtataacgaaaacttcaataaaaacaggtggatcagtgcagccaatcccggagat
ggcaagaccccttattataccaacggagaaaactggttgttaacggattatgtgattgaa
gatggttcttatgcagcaatcagaaatgtgatcctgggttataccattccctccaggttc
actaaaaaattgggagttaccggcatcaggttatacagctctgcagacaacctgctgtac
ctgatgggcaaatcgtatcggggcattaacccggaagcaagagctacttcttctcaatac
tcctctcctttgattgacgggtatcagcgtggagccttcccgatttccaggacttacact
tttgggatagacgttaacttttaa
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